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scnpilot_expt_750_bf_scaffold_951

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_951_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..655
DNA (654bp) protein (218aa)
cell division protein FtsY n=1 Tax=Thiobacillus thioparus RepID=UPI00036C836F
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria;
scnpilot_expt_750_bf_scaffold_951_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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652..1314
DNA (663bp) protein (221aa)
ABC transporter n=1 Tax=Thiobacillus thioparus RepID=UPI000370645D
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cell division ATP-binding protein FtsE
scnpilot_expt_750_bf_scaffold_951_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1311..2222
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FFA3B
cell division protein FtsX; K09811 cell division transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
cell division protein FtsX
scnpilot_expt_750_bf_scaffold_951_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2842..3672)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003643EE5
hlyD; HlyD-family type I secretion protein Tax=GWE1_Thiobacillus_62_9_curated
hlyD; HlyD-family type I secretion protein
scnpilot_expt_750_bf_scaffold_951_5
unknown

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3820..4077
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_951_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4287..6359)
DNA (2073bp) protein (691aa)
peptidase C39 n=1 Tax=Thiobacillus thioparus RepID=UPI00035C8DB1
protein-1 exporter Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
protein-1 exporter
scnpilot_expt_750_bf_scaffold_951_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6514..7032)
DNA (519bp) protein (173aa)
hypothetical protein id=12497245 bin=THIO_MID species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
putative rhizobiocin/RTX toxin and hemolysin-type calcium-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_951_8
unknown

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9559..9822
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_951_9
unknown

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comp(14160..15146)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037E2135
scnpilot_expt_750_bf_scaffold_951_10
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15163..15624)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037C02FD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_951_11
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15712..16203)
DNA (492bp) protein (164aa)
RTX toxin-activating protein C; K07389 cytolysin-activating lysine-acyltransferase [EC:2.3.1.-] Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003775504
RTX toxin-activating protein C
scnpilot_expt_750_bf_scaffold_951_12
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

16977..18044
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XJ11_9BACL
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
membrane protein, putative
scnpilot_expt_750_bf_scaffold_951_13
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18642..19067
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQU9_SIDLE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE11335.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotr
scnpilot_expt_750_bf_scaffold_951_14
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19328..20437)
DNA (1110bp) protein (370aa)
Putative Transcriptional regulator n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JAX2_9BURK rbh
Putative Transcriptional regulator {ECO:0000313|EMBL:CCD29924.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" so
hypothetical protein
scnpilot_expt_750_bf_scaffold_951_15
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20434..21075)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C6165
Uncharacterized protein {ECO:0000313|EMBL:EWS66306.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
Hypothetical protein
scnpilot_expt_750_bf_scaffold_951_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21673..22518
DNA (846bp) protein (282aa)
RNA polymerase sigma 70 n=1 Tax=Thiobacillus thioparus RepID=UPI00037CE403
sigma-70 factor; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Thiobacillus_62_9_curated
sigma-70 factor
Displaying 16 items

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