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scnpilot_expt_750_bf_scaffold_972

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_972_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003680820
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_972_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316..1062)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F317D
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_972_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..1655)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B9263
putative lipoprotein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
lipoprotein
scnpilot_expt_750_bf_scaffold_972_4
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

2228..2443
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
scnpilot_expt_750_bf_scaffold_972_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2449..2820
DNA (372bp) protein (124aa)
NC domain protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNN3_AZOSU
NC domain protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
NC domain protein
scnpilot_expt_750_bf_scaffold_972_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2849..3526
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
scnpilot_expt_750_bf_scaffold_972_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3531..4931
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_972_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5082..6494
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_expt_750_bf_scaffold_972_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6497..7537
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_972_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7534..10656
DNA (3123bp) protein (1041aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
scnpilot_expt_750_bf_scaffold_972_11
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10653..11858
DNA (1206bp) protein (402aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BHR9_RALP1
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
MFS transporter
scnpilot_expt_750_bf_scaffold_972_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11876..13906
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Pseudomonas RepID=UPI0003821A38 rbh
PA-phosphatase {ECO:0000313|EMBL:GAO35504.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PA-phosphatase-like phosphoesterase
scnpilot_expt_750_bf_scaffold_972_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13860..14150)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037E2A6E
Uncharacterized protein {ECO:0000313|EMBL:EPZ15169.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
LacI family transcriptional regulator
scnpilot_expt_750_bf_scaffold_972_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..14549)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645152
transposase
Transposase {ECO:0000313|EMBL:AJP47696.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_972_15
unknown

Not on your lists

comp(14762..14845)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 15 items

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