ggKbase home page

scnpilot_expt_750_bf_scaffold_5137

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_5137_1
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6..989)
DNA (984bp) protein (328aa)
Integron integrase Phage integrase Phage integrase N-terminal SAM-like domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820I6_NITEU rbh
intINeu; integron integrase
Tax=BJP_IG2158_Methylococcales_50_91
scnpilot_expt_750_bf_scaffold_5137_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1014..2339)
DNA (1326bp) protein (442aa)
Transposase IS4 n=2 Tax=Burkholderiaceae RepID=U3QY00_RALPI rbh
transposase IS4 rbh
Transposase IS4 {ECO:0000313|EMBL:AGW95789.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.
scnpilot_expt_750_bf_scaffold_5137_3
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2634..3569)
DNA (936bp) protein (312aa)
LysR family transcriptional regulator n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RM17_ERWST rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHT97574.1}; TaxID=660596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pant
bacterial regulatory helix-turn-helix , lysR family protein
scnpilot_expt_750_bf_scaffold_5137_4
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3711..4133
DNA (423bp) protein (141aa)
Pep1 n=3 Tax=root RepID=Q79BP1_ENTAE
Cupin {ECO:0000313|EMBL:EYC52143.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
cupin
scnpilot_expt_750_bf_scaffold_5137_5
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..4879
DNA (567bp) protein (189aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSR4_SIDLE
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADE12000.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellace
scnpilot_expt_750_bf_scaffold_5137_6
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4995..5294
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VIK6_POLNA
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_5137_7
unknown

Not on your lists

comp(5238..5669)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_5137_8
unknown

Not on your lists

5910..6248
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_5137_9
unknown

Not on your lists

comp(6342..6791)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_5137_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6872..7057
DNA (186bp) protein (62aa)
Amino acid transporter LysE n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTY9_9BURK
Amino acid transporter LysE {ECO:0000313|EMBL:EIK92679.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga
amino acid transporter LysE
Displaying 10 items

View Taxonomy