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scnpilot_expt_750_bf_scaffold_5423

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_5423_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..452)
DNA (450bp) protein (150aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000255|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogena
Gamma-glutamyl phosphate reductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=PROA_BEII9
scnpilot_expt_750_bf_scaffold_5423_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(568..1491)
DNA (924bp) protein (308aa)
Cation efflux protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWX1_9BRAD rbh
Cation efflux protein {ECO:0000313|EMBL:EAQ35517.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A
cation diffusion facilitator family transporter
scnpilot_expt_750_bf_scaffold_5423_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1517..1792)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJA2_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68095.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrop
scnpilot_expt_750_bf_scaffold_5423_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1907..3031)
DNA (1125bp) protein (375aa)
aldehyde dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000380599D rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJC49265.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
aldehyde dehydrogenase family protein
scnpilot_expt_750_bf_scaffold_5423_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3430..4068
DNA (639bp) protein (213aa)
LysR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7K3_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF18176.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Ni
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_5423_6
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4080..4301
DNA (222bp) protein (74aa)
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
scnpilot_expt_750_bf_scaffold_5423_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4408..5289
DNA (882bp) protein (294aa)
Bll7272 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89E15_BRADU
dihydrodipicolinate synthase
Uncharacterized protein {ECO:0000313|EMBL:KGJ63641.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium dia
scnpilot_expt_750_bf_scaffold_5423_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5506..6156)
DNA (651bp) protein (217aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA4_ACIC1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
carboxymuconolactone decarboxylase
scnpilot_expt_750_bf_scaffold_5423_9
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6303..7328
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46NU3_CUPPJ rbh
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AAZ65191.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
scnpilot_expt_750_bf_scaffold_5423_10
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7335..7670)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C6A06
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDZ40768.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_5423_11
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7675..8157)
DNA (483bp) protein (161aa)
LysR family transcriptional regulator n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F427_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EYS84948.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_5423_12
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8285..8419
DNA (135bp) protein (45aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F426_9BURK
metallo-beta-lactamase
Displaying 12 items

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