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scnpilot_expt_750_bf_scaffold_5697

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_5697_1
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..115
DNA (114bp) protein (38aa)
glycine cleavage system h protein; K02437 glycine cleavage system H protein id=12553243 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodofer
scnpilot_expt_750_bf_scaffold_5697_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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246..602
DNA (357bp) protein (119aa)
glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ58_ACIET
scnpilot_expt_750_bf_scaffold_5697_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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644..2968
DNA (2325bp) protein (775aa)
glycine dehydrogenase; K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1U5_ALIDB
glycine dehydrogenase
scnpilot_expt_750_bf_scaffold_5697_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3007..3480
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037D1650
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46012.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
scnpilot_expt_750_bf_scaffold_5697_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3527..4762
DNA (1236bp) protein (412aa)
PAS/PAC sensor hybrid histidine kinase id=12550291 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC sensor hybrid histidine kinase
scnpilot_expt_750_bf_scaffold_5697_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5252..5704
DNA (453bp) protein (151aa)
PAS/PAC sensor hybrid histidine kinase id=12550291 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
signal transduction histidine kinase, nitrogen specific, ntrb
scnpilot_expt_750_bf_scaffold_5697_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5691..6296
DNA (606bp) protein (202aa)
ribosomal large subunit pseudouridine synthase A (EC:5.4.99.-)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7DA3
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD24176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
scnpilot_expt_750_bf_scaffold_5697_8
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6293..7057
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ54_ACIET rbh
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACM33192.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
scnpilot_expt_750_bf_scaffold_5697_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7265..7774
DNA (510bp) protein (170aa)
Hemerythrin-like metal-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC77_ALIDK
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:GAO23466.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
scnpilot_expt_750_bf_scaffold_5697_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7819..8256)
DNA (438bp) protein (146aa)
UspA domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
UspA domain-containing protein id=12550281 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
UspA domain-containing protein
scnpilot_expt_750_bf_scaffold_5697_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8386..9537)
DNA (1152bp) protein (384aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Long-chain-fatty-acid--CoA ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0J4_9BURK
AMP-dependent synthetase and ligase
Displaying 11 items

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