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scnpilot_expt_750_bf_scaffold_7213

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_7213_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..915
DNA (915bp) protein (305aa)
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 id=12498577 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TrbG
scnpilot_expt_750_bf_scaffold_7213_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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918..2192
DNA (1275bp) protein (425aa)
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 id=12498576 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
conjugal transfer protein TrbI
scnpilot_expt_750_bf_scaffold_7213_3

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2189..2452
DNA (264bp) protein (88aa)
conjugal transfer protein id=12498575 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:CBH97701.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_7213_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2651..2944
DNA (294bp) protein (98aa)
Putative phage excisionase n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KSD5_PSEPG
putative phage excisionase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
putative phage excisionase
scnpilot_expt_750_bf_scaffold_7213_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3025..3240
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369E800
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_7213_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3257..3610
DNA (354bp) protein (118aa)
integrase n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003044C09
integrase family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
integrase family protein
scnpilot_expt_750_bf_scaffold_7213_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3611..4183
DNA (573bp) protein (191aa)
integrase n=1 Tax=Acidovorax radicis RepID=UPI00023777EE
integrase family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
integrase family protein
Displaying 7 items

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