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scnpilot_expt_750_bf_scaffold_7990

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_7990_1
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..1194
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BDC66
Type IV secretory pathway VirB4 components-like protein
Bacteroides conjugative transposon TraG-like protein {ECO:0000313|EMBL:ABQ06559.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;
scnpilot_expt_750_bf_scaffold_7990_2
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1762..2889
DNA (1128bp) protein (376aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WJ43_BACOV
Putative reverse transcriptase {ECO:0000313|EMBL:KGE12643.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
RNA-directed DNA polymerase
scnpilot_expt_750_bf_scaffold_7990_3
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2949..3386
DNA (438bp) protein (146aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=2 Tax=Bacteroides RepID=D4V503_BACVU
Putative reverse transcriptase {ECO:0000313|EMBL:KGE12643.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
RNA-directed DNA polymerase
scnpilot_expt_750_bf_scaffold_7990_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3383..3976
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BDC66
Conjugation system ATPase, TraG family protein {ECO:0000313|EMBL:KDS11441.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bactero
conjugate transposon protein
scnpilot_expt_750_bf_scaffold_7990_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4016..4663
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D60FC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92189.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_expt_750_bf_scaffold_7990_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4670..5290
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037CDA52
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92190.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_expt_750_bf_scaffold_7990_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5173..5424)
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Sphingomonadaceae RepID=M4S6Q1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKU72492.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
scnpilot_expt_750_bf_scaffold_7990_8
Mycobacterium colombiense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5421..5693)
DNA (273bp) protein (91aa)
LldD1 n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4SGN4_9MYCO
LldD1 {ECO:0000313|EMBL:EJO88610.1}; TaxID=1041522 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium col
putative FMN-dependent (S)-2-hydroxy-acid oxidase
Displaying 8 items

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