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scnpilot_expt_750_bf_scaffold_3472

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3472_1
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..570)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBZ7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EAT08456.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
virB4; type IV secretory pathway VirB4 component
scnpilot_expt_750_bf_scaffold_3472_2
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(563..901)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NBZ6_9SPHN
Type VI secretion protein {ECO:0000313|EMBL:EQB19007.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium l
type IV secretory pathway VirB3 component
scnpilot_expt_750_bf_scaffold_3472_3
unknown

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comp(912..1136)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3472_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1136..1447)
DNA (312bp) protein (104aa)
type VI secretion protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EAFB4C
Uncharacterized protein {ECO:0000313|EMBL:EKU72538.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
VIRB2 type IV secretion fmaily protein
scnpilot_expt_750_bf_scaffold_3472_5
unknown

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comp(1447..1701)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3472_6
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1698..2738)
DNA (1041bp) protein (347aa)
conjugal transfer protein n=1 Tax=Sphingomonas wittichii RepID=UPI00036CA97A rbh
Muramidase {ECO:0000313|EMBL:KHA62653.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
transglycosylase SLT domain protein
scnpilot_expt_750_bf_scaffold_3472_7
Novosphingobium sp. MBES04, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2963..3538
DNA (576bp) protein (192aa)
DNA resolvase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IBX3_9SPHN
DNA resolvase {ECO:0000313|EMBL:GAM07493.1}; TaxID=1206458 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. M
DNA resolvase
scnpilot_expt_750_bf_scaffold_3472_8
unknown

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comp(3516..3752)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3472_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3830..4087)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000366C607
XRE family transcriptional regulator
Xre-family transcriptional regulator {ECO:0000313|EMBL:BAI99208.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
scnpilot_expt_750_bf_scaffold_3472_10
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4444..4677
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IBX8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA89803.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_expt_750_bf_scaffold_3472_11
unknown

Not on your lists

4866..5192
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3472_12
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5355..5918
DNA (564bp) protein (188aa)
replication protein C n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD835
Replication protein C {ECO:0000313|EMBL:KKC24076.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
replication protein C
Displaying 12 items

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