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scnpilot_expt_750_bf_scaffold_3529

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3529_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..624)
DNA (624bp) protein (208aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J8R9_HYPSM
scnpilot_expt_750_bf_scaffold_3529_2
unknown

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comp(681..1400)
DNA (720bp) protein (240aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3529_3
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1414..1881)
DNA (468bp) protein (156aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Rhodobacter sp. SW2 RepID=C8RYR7_9RHOB
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EEW26255.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_3529_4
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2029..2352
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4ENI2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KAJ04066.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter med
hypothetical protein
scnpilot_expt_750_bf_scaffold_3529_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2349..2705
DNA (357bp) protein (119aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3R0C8_RALPI
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AGW94976.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
scnpilot_expt_750_bf_scaffold_3529_6
unknown

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comp(2708..3172)
DNA (465bp) protein (155aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
ribonuclease HI (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD37_9RHIZ
scnpilot_expt_750_bf_scaffold_3529_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3172..4140)
DNA (969bp) protein (323aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8B3_9RHIZ rbh
scnpilot_expt_750_bf_scaffold_3529_8
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4147..4929)
DNA (783bp) protein (261aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003700034
Displaying 8 items

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