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scnpilot_expt_750_bf_scaffold_3542

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3542_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2..163
DNA (162bp) protein (54aa)
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6); K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase id=12493694 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6); K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
scnpilot_expt_750_bf_scaffold_3542_2
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(884..1975)
DNA (1092bp) protein (364aa)
Integrase core domain-containing protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLG7_VARPD rbh
Integrase {ECO:0000313|EMBL:KDP87037.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
putative transposase rbh
scnpilot_expt_750_bf_scaffold_3542_3
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1972..2445)
DNA (474bp) protein (158aa)
Putative transposase, IS3/IS911 family n=1 Tax=Variovorax paradoxus B4 RepID=T1XCN2_VARPD
Transposase {ECO:0000313|EMBL:EYS84619.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
putative transposase, IS3/IS911 family
scnpilot_expt_750_bf_scaffold_3542_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2543..3187
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHY0_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97753.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_expt_750_bf_scaffold_3542_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3368..5302
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C8577 rbh
long-chain fatty acid transport protein; K06076 long-chain fatty acid transport protein Tax=GWE1_Thiobacillus_62_9_curated
long-chain fatty acid transport protein
scnpilot_expt_750_bf_scaffold_3542_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5550..6482
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377D4DF
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3542_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6519..7178
DNA (660bp) protein (220aa)
CAAX amino terminal protease n=1 Tax=Thiobacillus thioparus RepID=UPI00035E0A2E
CAAX amino terminal protease family protein; K07052 Tax=GWE1_Thiobacillus_62_9_curated
CAAX amino terminal protease
scnpilot_expt_750_bf_scaffold_3542_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7175..8629
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003756945
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3542_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8837..9631
DNA (795bp) protein (265aa)
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein id=12497708 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
polysaccharide export outer membrane protein
scnpilot_expt_750_bf_scaffold_3542_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9642..11030
DNA (1389bp) protein (463aa)
chain length determinant protein id=12497709 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
chain length determinant protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
chain length determinant protein
Displaying 10 items

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