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scnpilot_expt_750_bf_scaffold_3663

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3663_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..267)
DNA (267bp) protein (89aa)
Putative lipoprotein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH81_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ47720.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
scnpilot_expt_750_bf_scaffold_3663_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(280..936)
DNA (657bp) protein (219aa)
P-type conjugative transfer protein TrbJ n=4 Tax=Pseudomonas aeruginosa RepID=U8EFF7_PSEAI
trbJ; conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:BAJ72260.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_expt_750_bf_scaffold_3663_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(933..3392)
DNA (2460bp) protein (820aa)
Conjugal transfer ATPase TrbE n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC12_PSEAI rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EPZ14906.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 5
type IV transport system protein VirB
scnpilot_expt_750_bf_scaffold_3663_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3407..3676)
DNA (270bp) protein (90aa)
Conjugal transfer protein n=16 Tax=Pseudomonas aeruginosa RepID=E2ZY30_PSEAI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:AKC78380.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ca
conjugal transfer protein TrbD
scnpilot_expt_750_bf_scaffold_3663_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3673..4056)
DNA (384bp) protein (128aa)
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RH53_PSEAI
trbC; mating pair formation conjugal transfer TrbC transmembrane protein
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AIJ47716.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
scnpilot_expt_750_bf_scaffold_3663_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4053..5126)
DNA (1074bp) protein (358aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6D1V2_PSEST rbh
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EWC39969.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
trbB; P-type conjugative transfer ATPase TrbB
scnpilot_expt_750_bf_scaffold_3663_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5123..5530)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC83_PSEAI
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:KCV66866.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Borde
CopG/DNA-binding domain-containing protein
Displaying 7 items

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