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scnpilot_expt_750_bf_scaffold_4

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Displaying items 1-30 of 3205 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_4_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

735..1796
DNA (1062bp) protein (354aa)
hypothetical protein id=7721277 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR25239.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1789..2790
DNA (1002bp) protein (334aa)
4-nitrophenylphosphatase id=7721276 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
4-nitrophenylphosphatase {ECO:0000313|EMBL:EAR25240.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
4-nitrophenylphosphatase
scnpilot_expt_750_bf_scaffold_4_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2793..2951
DNA (159bp) protein (53aa)
Putative uncharacterized protein id=7721275 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25241.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
scnpilot_expt_750_bf_scaffold_4_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3043..3732
DNA (690bp) protein (230aa)
hypothetical protein; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] id=7721274 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Hemolysin {ECO:0000313|EMBL:EAR25242.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3750..4676
DNA (927bp) protein (309aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] id=7721273 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
inorganic polyphosphate/ATP-NAD kinase
scnpilot_expt_750_bf_scaffold_4_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4673..6364
DNA (1692bp) protein (564aa)
recN; DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) id=7721272 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC2
DNA repair protein RecN
scnpilot_expt_750_bf_scaffold_4_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6401..7105
DNA (705bp) protein (235aa)
hypothetical protein id=7721271 bin=CNBR_ACT species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
UPF0114 protein N136_01341 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7153..8853
DNA (1701bp) protein (567aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] id=7721270 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthetase
scnpilot_expt_750_bf_scaffold_4_9
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8846..9466
DNA (621bp) protein (207aa)
putative NTP pyrophosphatase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] id=7721269 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
NUDIX hydrolase {ECO:0000313|EMBL:EAR25249.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative NTP pyrophosphatase
scnpilot_expt_750_bf_scaffold_4_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9463..10377
DNA (915bp) protein (305aa)
xerD; site-specific tyrosine recombinase XerD; K04763 integrase/recombinase XerD id=7721268 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
site-specific tyrosine recombinase XerD
scnpilot_expt_750_bf_scaffold_4_11
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10462..11349
DNA (888bp) protein (296aa)
putative ATPase involved in partitioning; K03496 chromosome partitioning protein id=7721267 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Chromosome (Plasmid) partitioning protein ParA {ECO:0000313|EMBL:EPR75434.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CM
chromosome partitioning protein
scnpilot_expt_750_bf_scaffold_4_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11333..12163
DNA (831bp) protein (277aa)
hypothetical protein; K05896 segregation and condensation protein A id=7721266 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR25252.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_13
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12153..12749
DNA (597bp) protein (199aa)
putative transcriptional regulator; K06024 segregation and condensation protein B id=7721265 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Segregation and condensation protein B {ECO:0000313|EMBL:EPR75432.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
putative transcriptional regulator
scnpilot_expt_750_bf_scaffold_4_14
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12736..13521
DNA (786bp) protein (262aa)
rsuA; RNA pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] id=7721264 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" so
rsuA; RNA pseudouridine synthase
scnpilot_expt_750_bf_scaffold_4_15
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13508..14605
DNA (1098bp) protein (366aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] id=7721263 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02632.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
prephenate dehydrogenase
scnpilot_expt_750_bf_scaffold_4_16
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14602..15267
DNA (666bp) protein (222aa)
cmkA; putative cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=7721262 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cmkA; putative cytidylate kinase (EC:2.7.4.14)
scnpilot_expt_750_bf_scaffold_4_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15282..16793
DNA (1512bp) protein (504aa)
engA; GTP-binding protein EngA; K03977 GTP-binding protein id=7721261 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales;
engA; GTP-binding protein
scnpilot_expt_750_bf_scaffold_4_18
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16797..17267
DNA (471bp) protein (157aa)
NTP pyrophosphohydrolase including oxidative damage repair enzyme id=7721260 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL26393.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_expt_750_bf_scaffold_4_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17286..18770)
DNA (1485bp) protein (495aa)
EmrB/QacA subfamily drug resistance transporter id=7721259 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Lincomycin resistance protein lmrb {ECO:0000313|EMBL:EAR25258.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
EmrB/QacA subfamily drug resistance transporter
scnpilot_expt_750_bf_scaffold_4_trna_1
unknown

Not on your lists

18921..18994
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_4_20
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19268..20155)
DNA (888bp) protein (296aa)
hypothetical protein id=7721258 bin=CNBR_ACT species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL08565.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20311..20901
DNA (591bp) protein (197aa)
N-acetyltransferase GCN5 id=7721257 bin=CNBR_ACT species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
putative GCN5-related N-acetyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
N-acetyltransferase GCN5
scnpilot_expt_750_bf_scaffold_4_22
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20864..22087)
DNA (1224bp) protein (408aa)
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein id=7721256 bin=CNBR_ACT species=Arthrobacter gangotriensis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Drug resistance transporter {ECO:0000313|EMBL:EMQ97904.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
Bcr/CflA subfamily drug resistance transporter
scnpilot_expt_750_bf_scaffold_4_23
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22096..23067)
DNA (972bp) protein (324aa)
alpha/beta hydrolase id=7721255 bin=CNBR_ACT species=Streptomyces sp. AA4 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KES04946.1}; TaxID=55952 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
alpha/beta hydrolase fold-3 domain-containing protein
scnpilot_expt_750_bf_scaffold_4_24
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23101..23763)
DNA (663bp) protein (221aa)
transcriptional regulator TrmB id=7721254 bin=CNBR_ACT species=Beutenbergia cavernae genus=Beutenbergia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGJ72156.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkunde
transcriptional regulator TrmB
scnpilot_expt_750_bf_scaffold_4_25
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23837..25654
DNA (1818bp) protein (606aa)
phenol 2-monooxygenase (EC:1.14.13.7); K03380 phenol 2-monooxygenase [EC:1.14.13.7] id=7721253 bin=CNBR_ACT species=unknown genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Phenol 2-monooxygenase {ECO:0000313|EMBL:KHL01443.1}; EC=1.14.13.7 {ECO:0000313|EMBL:KHL01443.1};; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="
flavoprotein monooxygenase
scnpilot_expt_750_bf_scaffold_4_26
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25644..26720)
DNA (1077bp) protein (359aa)
hypothetical protein id=7721252 bin=CNBR_ACT species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH17185.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
scnpilot_expt_750_bf_scaffold_4_27
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26757..27335
DNA (579bp) protein (193aa)
HhH-GPD family protein id=7721251 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89156.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
HhH-GPD family protein
scnpilot_expt_750_bf_scaffold_4_28
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27280..28359)
DNA (1080bp) protein (360aa)
glycosyl transferase id=7721250 bin=CNBR_ACT species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Glycosyltransferase {ECO:0000313|EMBL:KIA71552.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
glycosyl transferase
scnpilot_expt_750_bf_scaffold_4_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28363..29262)
DNA (900bp) protein (300aa)
exopolysaccharide biosynthesis protein id=7721249 bin=CNBR_ACT species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDK00625.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C4
exopolysaccharide biosynthesis protein
Displaying items 1-30 of 3205 in total

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