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scnpilot_expt_750_bf_scaffold_1178

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1178_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
Integrase family protein n=1 Tax=Pseudomonas aeruginosa PA45 RepID=N4VX29_PSEAI
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACS61998.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
scnpilot_expt_750_bf_scaffold_1178_trna_1
unknown

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comp(679..749)
DNA (71bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1178_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(784..1125)
DNA (342bp) protein (114aa)
Regulatory protein ArsR n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q2_ALIDB
regulatory protein arsr
Regulatory protein ArsR {ECO:0000313|EMBL:GAO23260.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
scnpilot_expt_750_bf_scaffold_1178_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1213..2265
DNA (1053bp) protein (351aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1Q1_ALIDB rbh
efflux transporter, rnd family, mfp subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00040.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicy
scnpilot_expt_750_bf_scaffold_1178_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2267..5506
DNA (3240bp) protein (1080aa)
Acriflavin resistance protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1Q0_ALIDB rbh
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEB84856.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
scnpilot_expt_750_bf_scaffold_1178_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5503..6939
DNA (1437bp) protein (479aa)
Outer membrane efflux protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1P9_ALIDB
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:GAO23263.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
scnpilot_expt_750_bf_scaffold_1178_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6974..8260
DNA (1287bp) protein (429aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD95_ALIDK
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEB84854.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicyclip
scnpilot_expt_750_bf_scaffold_1178_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8321..9457
DNA (1137bp) protein (379aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
fad-dependent pyridine nucleotide-disulfide oxidoreductase id=12551786 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
fad-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_expt_750_bf_scaffold_1178_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9525..9734
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD93_ALIDK
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1178_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9767..9964
DNA (198bp) protein (66aa)
membrane protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000370847F
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:EER60086.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_expt_750_bf_scaffold_1178_10
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10023..10727)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJ73_POLNA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1178_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10720..11208)
DNA (489bp) protein (163aa)
XRE family transcriptional regulator id=12550162 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
XRE family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1178_12
unknown

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comp(11314..11829)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1178_13
Pseudomonas sp. KKS102, Proteobacteria, Bacteria

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comp(13181..13801)
DNA (621bp) protein (207aa)
Transposase n=3 Tax=Proteobacteria RepID=E7FJA7_9BURK
transposase IS4 family protein
Transposase {ECO:0000313|EMBL:BAB64311.1}; TaxID=307 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp. (strain KKS102).;"
scnpilot_expt_750_bf_scaffold_1178_14
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13836..14309
DNA (474bp) protein (158aa)
Transposase n=2 Tax=Burkholderia RepID=J2RUB1_9BURK
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:EWS66431.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sour
transposase
Displaying 15 items

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