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scnpilot_expt_750_bf_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_238_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1044
DNA (1044bp) protein (348aa)
Heavy metal translocating P-type ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI8_ALIDB
heavy metal translocating p-type atpase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADV00462.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
scnpilot_expt_750_bf_scaffold_238_2
Leptospira biflexa, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(956..1654)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) RepID=B0SK03_LEPBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ96579.1}; TaxID=456481 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira biflexa serovar Patoc (strain Patoc
scnpilot_expt_750_bf_scaffold_238_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..2232
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI7_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00461.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_expt_750_bf_scaffold_238_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2354..2812
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI6_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00460.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_expt_750_bf_scaffold_238_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2888..4204
DNA (1317bp) protein (439aa)
CzcC family heavy metal RND efflux outer membrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI5_ALIDB rbh
czcc family heavy metal rnd efflux outer membrane protein
CzcC family heavy metal RND efflux outer membrane protein {ECO:0000313|EMBL:ADV00459.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
scnpilot_expt_750_bf_scaffold_238_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4220..5611
DNA (1392bp) protein (464aa)
Heavy metal RND efflux membrane fusion protein, CzcB family n=3 Tax=Gammaproteobacteria RepID=B8L2P4_9GAMM
Heavy metal RND efflux membrane fusion protein, CzcB family {ECO:0000313|EMBL:EED38064.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Steno
RND family efflux transporter MFP subunit 3
scnpilot_expt_750_bf_scaffold_238_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5608..8730
DNA (3123bp) protein (1041aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTI3_ALIDB rbh
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:GAO21820.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
heavy metal efflux pump, czca family rbh
scnpilot_expt_750_bf_scaffold_238_8
unknown

Not on your lists

comp(9250..9351)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_238_9
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..9787)
DNA (450bp) protein (150aa)
Mercuric resistance transcriptional repressor protein MerD n=4 Tax=Burkholderiales RepID=F4G781_ALIDK
hypothetical protein
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE37072.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_expt_750_bf_scaffold_238_10
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9805..11418)
DNA (1614bp) protein (538aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=1007105 species="Bacteria; Proteobacteria; Bet
Mercuric reductase n=5 Tax=Proteobacteria RepID=F4G782_ALIDK
scnpilot_expt_750_bf_scaffold_238_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11457..11882)
DNA (426bp) protein (142aa)
Inner membrane Hg(II) uptake protein n=85 Tax=Proteobacteria RepID=Q7BRH8_ECOLX
merC; mercury transport protein MerC
Klebsiella pneumoniae genome assembly ST15 {ECO:0000313|EMBL:CEO85428.1}; MerC {ECO:0000313|EMBL:AAM44225.1}; Mercuric resistance protein MerC {ECO:0000313|EMBL:AIT05021.1}; Mercuric transport protein
scnpilot_expt_750_bf_scaffold_238_12
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11910..12185)
DNA (276bp) protein (92aa)
P-type HAD superfamily ATPase n=1 Tax=Acinetobacter baumannii MSP4-16 RepID=M2YWG6_ACIBA
P-type HAD superfamily ATPase
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=40215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Ac
scnpilot_expt_750_bf_scaffold_238_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12199..12549)
DNA (351bp) protein (117aa)
Mercuric transport protein MerT n=3 Tax=Burkholderiales RepID=F4G785_ALIDK
mercuric transport protein MerT
Mercuric transport protein MerT {ECO:0000313|EMBL:EER59063.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
scnpilot_expt_750_bf_scaffold_238_14
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12621..13055
DNA (435bp) protein (145aa)
Transcriptional regulator, MerR family n=6 Tax=Proteobacteria RepID=F4G786_ALIDK
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABE37077.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
scnpilot_expt_750_bf_scaffold_238_15
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..13838
DNA (561bp) protein (187aa)
Site-specific recombinase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W59_NITEU
tnpR; site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:CAD84747.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas e
scnpilot_expt_750_bf_scaffold_238_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13841..15274
DNA (1434bp) protein (478aa)
Transposase Tn3 family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W60_NITEU
Transposase Tn21 {ECO:0000313|EMBL:KGH12742.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomon
tnpA; Tn3 family transposase
scnpilot_expt_750_bf_scaffold_238_17
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15271..15519
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8NGE5_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KHK65560.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas freder
Hypothetical protein
scnpilot_expt_750_bf_scaffold_238_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..16723)
DNA (957bp) protein (319aa)
5''''-nucleotidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E7866 rbh
5'-nucleotidase {ECO:0000313|EMBL:GAD23550.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
5'-nucleotidase
scnpilot_expt_750_bf_scaffold_238_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16729..17952)
DNA (1224bp) protein (408aa)
General secretion pathway protein F n=2 Tax=Alicycliphilus denitrificans RepID=E8TZK6_ALIDB rbh
general secretion pathway protein f
General secretion pathway protein F {ECO:0000313|EMBL:ADU98553.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
scnpilot_expt_750_bf_scaffold_238_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17971..18972)
DNA (1002bp) protein (334aa)
Luciferase family oxidoreductase, group 1 n=2 Tax=Alicycliphilus denitrificans RepID=E8TZK7_ALIDB rbh
luciferase family oxidoreductase
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:ADU98554.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
scnpilot_expt_750_bf_scaffold_238_21
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19043..19534
DNA (492bp) protein (164aa)
YbcL n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PI83_CELJU
hypothetical protein
YbcL {ECO:0000313|EMBL:ACE84733.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107)
scnpilot_expt_750_bf_scaffold_238_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19543..20931)
DNA (1389bp) protein (463aa)
Type II secretion system protein E (GspE) n=2 Tax=Acidovorax RepID=A1W3T6_ACISJ rbh
general secretory pathway protein e
General secretory pathway protein E {ECO:0000313|EMBL:ACM32125.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
scnpilot_expt_750_bf_scaffold_238_23
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20950..23271)
DNA (2322bp) protein (774aa)
General secretion pathway protein D n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3T7_ACISJ
General secretion pathway protein D {ECO:0000313|EMBL:ABM40912.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
general secretion pathway protein D
scnpilot_expt_750_bf_scaffold_238_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23276..24070)
DNA (795bp) protein (265aa)
Putative general secretory pathway N transmembrane protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZL1_ALIDB
general secretory pathway N transmembrane protein
Putative general secretory pathway N transmembrane protein {ECO:0000313|EMBL:ADU98558.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
scnpilot_expt_750_bf_scaffold_238_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24070..24570)
DNA (501bp) protein (167aa)
General secretion pathway M protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZL2_ALIDB
general secretion pathway m protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_expt_750_bf_scaffold_238_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24567..25790)
DNA (1224bp) protein (408aa)
general secretion pathway protein L n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370C6E8
General secretion pathway L {ECO:0000313|EMBL:GAD20667.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR
general secretion pathway L
scnpilot_expt_750_bf_scaffold_238_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25787..26785)
DNA (999bp) protein (333aa)
Type II secretion system protein K n=2 Tax=Alicycliphilus denitrificans RepID=E8TZL4_ALIDB rbh
general secretion pathway protein K
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
scnpilot_expt_750_bf_scaffold_238_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26782..27477)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G703_ALIDK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83169.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_expt_750_bf_scaffold_238_29
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27477..27839)
DNA (363bp) protein (121aa)
General secretion pathway protein I n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3U3_ACISJ
general secretion pathway protein I
General secretion pathway protein I {ECO:0000313|EMBL:ABE43273.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;
scnpilot_expt_750_bf_scaffold_238_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27836..28297)
DNA (462bp) protein (154aa)
General secretion pathway protein H n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G705_ALIDK
general secretion pathway protein h
General secretion pathway protein H {ECO:0000313|EMBL:ADU98564.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
Displaying items 1-30 of 112 in total

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