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scnpilot_expt_750_bf_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_332_1
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133..1098)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003643C95 rbh
2-nitropropane dioxygenase NPD Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
2-nitropropane dioxygenase NPD
scnpilot_expt_750_bf_scaffold_332_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1613..1951)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y0W9_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB35386.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodni
scnpilot_expt_750_bf_scaffold_332_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2541..4709)
DNA (2169bp) protein (723aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HUI2_9BURK
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFU44397.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_expt_750_bf_scaffold_332_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4724..5929)
DNA (1206bp) protein (402aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFU44398.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AFU44398.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN12_9BURK
scnpilot_expt_750_bf_scaffold_332_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6031..6984)
DNA (954bp) protein (318aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F61
acyl-CoA dehydrogenase-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
acyl-CoA dehydrogenase-like protein
scnpilot_expt_750_bf_scaffold_332_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6991..7200)
DNA (210bp) protein (70aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUM8_9BURK
acyl-CoA dehydrogenase-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_expt_750_bf_scaffold_332_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7313..8482)
DNA (1170bp) protein (390aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CUU9_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL78974.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative ABC transporter, branched-chain amino acid-binding protein
scnpilot_expt_750_bf_scaffold_332_8
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8541..10412)
DNA (1872bp) protein (624aa)
fatty-acid--CoA ligase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B2ADE
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EJE48391.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
AMP-dependent synthetase and ligase
scnpilot_expt_750_bf_scaffold_332_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10417..11208)
DNA (792bp) protein (264aa)
ABC transporter-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HN17_9BURK
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AFU44403.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KK
scnpilot_expt_750_bf_scaffold_332_10
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11205..12044)
DNA (840bp) protein (280aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1E7T5_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJE48389.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
ABC transporter-like protein
scnpilot_expt_750_bf_scaffold_332_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12041..13117)
DNA (1077bp) protein (359aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HX46_9BURK
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFU44405.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS
scnpilot_expt_750_bf_scaffold_332_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13127..14056)
DNA (930bp) protein (310aa)
Inner-membrane translocator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I651_9BURK
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AFU44406.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS
scnpilot_expt_750_bf_scaffold_332_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14147..14560)
DNA (414bp) protein (138aa)
thioesterase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003697BDA
Acyl-CoA hydrolase {ECO:0000313|EMBL:GAD20324.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
thioesterase superfamily protein
scnpilot_expt_750_bf_scaffold_332_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14619..15578)
DNA (960bp) protein (320aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 id=12553496 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cytochrome oxidase assembly protein
scnpilot_expt_750_bf_scaffold_332_15
unknown

Not on your lists

15579..15761
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_332_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15815..15973
DNA (159bp) protein (53aa)
hypothetical protein id=12553495 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_332_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15987..16526
DNA (540bp) protein (180aa)
Cytochrome c oxidase subunit II n=2 Tax=Alicycliphilus denitrificans RepID=E8TQG9_ALIDB
cytochrome c oxidase subunit II
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:AEB86230.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
scnpilot_expt_750_bf_scaffold_332_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16542..18242
DNA (1701bp) protein (567aa)
Cytochrome c oxidase chain I (EC:1.9.3.1)
Cytochrome c oxidase chain I {ECO:0000313|EMBL:CDM22946.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CDM22946.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH0_ALIDB
scnpilot_expt_750_bf_scaffold_332_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18275..19177
DNA (903bp) protein (301aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFZ2_ALIDK rbh
protoheme IX farnesyltransferase
scnpilot_expt_750_bf_scaffold_332_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19189..20052
DNA (864bp) protein (288aa)
Redoxin domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH2_ALIDB
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEB86227.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphil
scnpilot_expt_750_bf_scaffold_332_21
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20148..21647
DNA (1500bp) protein (500aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFZ0_ALIDK rbh
methyl-viologen-reducing hydrogenase subunit delta
Methyl-viologen-reducing hydrogenase delta subunit {ECO:0000313|EMBL:AEB86226.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;"
scnpilot_expt_750_bf_scaffold_332_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21644..22147
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH4_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV01329.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_expt_750_bf_scaffold_332_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22165..23577
DNA (1413bp) protein (471aa)
Putative cytochrome c oxidase, subunit I n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TQH5_ALIDB
cytochrome c oxidase subunit I
Putative cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADV01330.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
scnpilot_expt_750_bf_scaffold_332_24
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23591..25519
DNA (1929bp) protein (643aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH6_ALIDB rbh
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ADV01331.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="
scnpilot_expt_750_bf_scaffold_332_25
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25640..27463
DNA (1824bp) protein (608aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5G7_ALIDK
Metal ABC transporter permease {ECO:0000313|EMBL:KJA12010.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax tempe
scnpilot_expt_750_bf_scaffold_332_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27545..28528)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D9E05 rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit {ECO:0000313|EMBL:GAD20326.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobac
transketolase
scnpilot_expt_750_bf_scaffold_332_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28525..29532)
DNA (1008bp) protein (336aa)
pyruvate dehydrogenase (EC:1.2.4.1)
UPI0003A91002 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A91002 rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit {ECO:0000313|EMBL:GAD20327.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteoba
scnpilot_expt_750_bf_scaffold_332_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29654..30691)
DNA (1038bp) protein (346aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Acidovorax sp. CF316 RepID=J0U3V6_9BURK
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:EJE50817.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; B
TRAP dicarboxylate transporter subunit DctP
scnpilot_expt_750_bf_scaffold_332_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30724..32022)
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter DctM subunit n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RX26_COMTE
TRAP dicarboxylate transporter subunit DctM Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
C4-dicarboxylate ABC transporter
scnpilot_expt_750_bf_scaffold_332_30
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32019..32573)
DNA (555bp) protein (185aa)
C4-dicarboxylate ABC transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036593F0
TRAP dicarboxylate transporter subunit DctQ {ECO:0000313|EMBL:GAO20610.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
TRAP dicarboxylate transporter subunit DctQ
Displaying items 1-30 of 69 in total

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