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scnpilot_expt_750_bf_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_489_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120..1055)
DNA (936bp) protein (312aa)
Ribosome biogenesis GTPase A n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8U5_ACISJ
hsr1-like GTP-binding protein
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
scnpilot_expt_750_bf_scaffold_489_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1079..2818
DNA (1740bp) protein (580aa)
thiamine pyrophosphate protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000372345B
Thiamine pyrophosphate protein {ECO:0000313|EMBL:GAD21345.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
thiamine pyrophosphate protein
scnpilot_expt_750_bf_scaffold_489_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2800..3492)
DNA (693bp) protein (231aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBP5_9GAMM
soxF; Rieske-I iron sulfur protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_expt_750_bf_scaffold_489_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..4901)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376FFF7
Sulfur oxidation protein, flavocytochrome C {ECO:0000313|EMBL:EIL96887.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sou
sulfur oxidation protein, flavocytochrome C
scnpilot_expt_750_bf_scaffold_489_5
unknown

Not on your lists

comp(5213..5524)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_489_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..6996)
DNA (1470bp) protein (490aa)
cytosol aminopeptidase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003637583
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1268622 spec
peptidase M17 leucyl aminopeptidase domain-containing protein
scnpilot_expt_750_bf_scaffold_489_7
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7068..8162
DNA (1095bp) protein (365aa)
Permease YjgP/YjgQ family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ43_ACIET
permease yjgp/yjgq family protein
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ACM33181.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
scnpilot_expt_750_bf_scaffold_489_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8159..9259
DNA (1101bp) protein (367aa)
YjgP/YjgQ family permease n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379600D
Predicted permeases {ECO:0000313|EMBL:GAD22036.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
permease yjgp/yjgq family protein
scnpilot_expt_750_bf_scaffold_489_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9320..10261
DNA (942bp) protein (314aa)
transcriptional regulator CysB-like protein n=1 Tax=Acidovorax radicis RepID=UPI000237512C
transcriptional regulator CysB-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
transcriptional regulator CysB-like protein
scnpilot_expt_750_bf_scaffold_489_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10277..11428
DNA (1152bp) protein (384aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7)
aminotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BAB6
Kynurenine--oxoglutarate transaminase {ECO:0000313|EMBL:GAD22033.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
scnpilot_expt_750_bf_scaffold_489_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11475..12956)
DNA (1482bp) protein (494aa)
Ribonuclease, Rne/Rng family n=2 Tax=Alicycliphilus denitrificans RepID=E8U0G8_ALIDB
Rne/Rng family ribonuclease
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ADU99903.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
scnpilot_expt_750_bf_scaffold_489_12

Not on your lists

13011..14201
DNA (1191bp) protein (397aa)
hydroxylamine reductase (EC:1.7.99.1)
Putative dissimilatory reductase NirS n=1 Tax=uncultured bacterium 6254 RepID=B8R975_9BACT
Putative dissimilatory reductase NirS {ECO:0000313|EMBL:ACF98231.1}; TaxID=548903 species="Bacteria; environmental samples.;" source="uncultured bacterium 6254.;"
scnpilot_expt_750_bf_scaffold_489_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14164..14820)
DNA (657bp) protein (219aa)
Maf-like protein Dtpsy_1708 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ27_ACIET
maf protein
Maf-like protein Dtpsy_1708 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebr
scnpilot_expt_750_bf_scaffold_489_14
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14909..15934
DNA (1026bp) protein (342aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV4_9BURK rbh
putative ABC transporter substrate binding protein
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_expt_750_bf_scaffold_489_15
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16111..16923
DNA (813bp) protein (271aa)
NitT family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV3_9BURK rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_expt_750_bf_scaffold_489_16
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16930..17757
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV2_9BURK rbh
ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_expt_750_bf_scaffold_489_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17819..18286)
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
50S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373FA20
hypothetical protein
scnpilot_expt_750_bf_scaffold_489_18
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18299..18979)
DNA (681bp) protein (227aa)
Ribosomal silencing factor RsfS n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0F6_ALIDB rbh
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
scnpilot_expt_750_bf_scaffold_489_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19081..20019)
DNA (939bp) protein (313aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax sp. CF316 RepID=J1EBZ7_9BURK
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
scnpilot_expt_750_bf_scaffold_489_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20016..21290)
DNA (1275bp) protein (425aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F4_ALIDB
scnpilot_expt_750_bf_scaffold_489_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21373..22092)
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein CtCNB1_2899 n=3 Tax=Comamonas testosteroni RepID=D0J0H4_COMT2 rbh
hypothetical protein
Probable transcriptional regulatory protein P245_03805 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;"
scnpilot_expt_750_bf_scaffold_489_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22156..23673
DNA (1518bp) protein (506aa)
Putative hydrolase {ECO:0000313|EMBL:EIK92471.1}; EC=3.6.1.15 {ECO:0000313|EMBL:EIK92471.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydro
Putative hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTD1_9BURK
hypothetical protein
scnpilot_expt_750_bf_scaffold_489_23
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23761..24726
DNA (966bp) protein (322aa)
Threo-3-hydroxyaspartate ammonia-lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXL8_9BURK
Threo-3-hydroxyaspartate ammonia-lyase {ECO:0000313|EMBL:EHL22828.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
pyridoxal-5'-phosphate-dependent enzyme subunit beta
scnpilot_expt_750_bf_scaffold_489_24
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24744..25373
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-R
Uracil phosphoribosyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=UPP_ACISJ
scnpilot_expt_750_bf_scaffold_489_25
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25403..25777
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTN0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20986.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
scnpilot_expt_750_bf_scaffold_489_26
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26122..26448
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036FAE71
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26761.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_expt_750_bf_scaffold_489_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26461..27291
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CF236
iron permease FTR1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
iron permease FTR1
scnpilot_expt_750_bf_scaffold_489_28
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27330..28082
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003778C5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47278.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_489_29
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28220..29941)
DNA (1722bp) protein (574aa)
nitrite reductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037120F7 rbh
Hydroxylamine reductase {ECO:0000313|EMBL:GAD22027.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
nirS; nitrite reductase (NO-forming) NirS
scnpilot_expt_750_bf_scaffold_489_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30190..32448
DNA (2259bp) protein (753aa)
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein id=12553311 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
tonb-dependent hemoglobin/transferrin/lactoferrin family receptor
Displaying items 1-30 of 44 in total

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