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scnpilot_expt_750_bf_scaffold_548

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_548_1
Stylonychia lemnae, Stylonychia, Sporadotrichida, Stichotrichia, Eukaryota

Not on your lists

2..202
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036E3004
Transposase {ECO:0000313|EMBL:CDW88538.1}; TaxID=5949 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Stylonychinae; Stylonyc
transposase
scnpilot_expt_750_bf_scaffold_548_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243..3962)
DNA (3720bp) protein (1240aa)
Family 2 glycosyl transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BT07_9BURK rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:EHL24501.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. N
family 2 glycosyl transferase
scnpilot_expt_750_bf_scaffold_548_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4066..4815
DNA (750bp) protein (250aa)
Glycosyl transferase, family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T1F2_ACIDE
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EER61710.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
glycosyl transferase family protein
scnpilot_expt_750_bf_scaffold_548_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4812..5912
DNA (1101bp) protein (367aa)
Glycosyl transferase, family 4 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3K9_ACISJ rbh
glycosyl transferase family protein
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABM40834.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_expt_750_bf_scaffold_548_5
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6018..6905
DNA (888bp) protein (296aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=ARGB_ACIAC
scnpilot_expt_750_bf_scaffold_548_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7003..7650
DNA (648bp) protein (216aa)
Regulatory protein TetR n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TY43_ALIDB
regulatory protein tetr
Regulatory protein TetR {ECO:0000313|EMBL:ADU98442.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_expt_750_bf_scaffold_548_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7686..9482
DNA (1797bp) protein (599aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L4_ACISJ
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABM40839.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
acyl-CoA dehydrogenase domain-containing protein
scnpilot_expt_750_bf_scaffold_548_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9527..9955
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI000370745B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83052.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
scnpilot_expt_750_bf_scaffold_548_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..12397
DNA (2421bp) protein (807aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABM40841.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABM40841.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L6_ACISJ
scnpilot_expt_750_bf_scaffold_548_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12419..13618
DNA (1200bp) protein (400aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ABM40842.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ABM40842.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3L7_ACISJ
acetyl-CoA acetyltransferase
scnpilot_expt_750_bf_scaffold_548_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13639..14532
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037D42BE
Predicted alpha/beta hydrolase {ECO:0000313|EMBL:GAD20319.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
hydrolase
scnpilot_expt_750_bf_scaffold_548_12
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14529..15362
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W3L9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40844.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
scnpilot_expt_750_bf_scaffold_548_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15367..16152
DNA (786bp) protein (262aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AC6FE rbh
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:GAD20321.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
enoyl-CoA hydratase/isomerase
scnpilot_expt_750_bf_scaffold_548_14
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16890..17549
DNA (660bp) protein (220aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KCX7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE48998.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_548_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17546..18451
DNA (906bp) protein (302aa)
2,4-dienoyl-CoA reductase n=1 Tax=Variovorax paradoxus RepID=UPI000361CAC1
Uncharacterized protein {ECO:0000313|EMBL:EJL72634.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
short-chain dehydrogenase/reductase SDR
scnpilot_expt_750_bf_scaffold_548_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18448..20094
DNA (1647bp) protein (549aa)
Carboxyl transferase n=1 Tax=Comamonas testosteroni S44 RepID=D8DC22_COMTE
3-methylcrotonyl-CoA carboxylase subunit beta {ECO:0000313|EMBL:KGH08149.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
carboxyl transferase
scnpilot_expt_750_bf_scaffold_548_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20114..21292
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase-like protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5J2_COMT2
acyl-CoA dehydrogenase-like protein
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGH03288.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pse
scnpilot_expt_750_bf_scaffold_548_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21289..23355
DNA (2067bp) protein (689aa)
Carbamoyl-phosphate synthase L chain n=1 Tax=Comamonas testosteroni S44 RepID=D8DC25_COMTE rbh
Carbamoyl-phosphate synthase L chain {ECO:0000313|EMBL:EFI59524.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas
carbamoyl-phosphate synthase L chain
scnpilot_expt_750_bf_scaffold_548_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23352..24512
DNA (1161bp) protein (387aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375F68
acyL-CoA dehydrogenase domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
putative acyl-CoA dehydrogenase
scnpilot_expt_750_bf_scaffold_548_20
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24519..25298
DNA (780bp) protein (260aa)
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI000381F18A
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGH32298.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudo
enoyL-CoA hydratase/isomerase
scnpilot_expt_750_bf_scaffold_548_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25295..27157
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CW05_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS16703.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
scnpilot_expt_750_bf_scaffold_548_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27154..28740
DNA (1587bp) protein (529aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J5J9_COMT2 rbh
long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ACY32472.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
scnpilot_expt_750_bf_scaffold_548_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28759..29727)
DNA (969bp) protein (323aa)
Transcriptional regulator, AraC family n=2 Tax=Ralstonia pickettii RepID=B2UHY7_RALPJ rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACS65445.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
scnpilot_expt_750_bf_scaffold_548_24
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29865..30524
DNA (660bp) protein (220aa)
Isochorismatase hydrolase n=2 Tax=Ralstonia pickettii RepID=B2UHY6_RALPJ rbh
isochorismatase hydrolase
Isochorismatase {ECO:0000313|EMBL:KHK54792.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
scnpilot_expt_750_bf_scaffold_548_25
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30664..32109
DNA (1446bp) protein (482aa)
transporter id=12557872 bin=CNBR_ACIDO species=Pusillimonas noertemannii genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
transporter
Putative transporter {ECO:0000313|EMBL:CBL46462.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_expt_750_bf_scaffold_548_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32142..36185
DNA (4044bp) protein (1348aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWK3_ALIDB rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ADU99526.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
delta-1-pyrroline-5-carboxylate dehydrogenase
scnpilot_expt_750_bf_scaffold_548_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36243..37433
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D372BD
probable transporter
Probable transporter {ECO:0000313|EMBL:CDM23083.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
scnpilot_expt_750_bf_scaffold_548_28
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37546..38094)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VRA2_ALCBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL16296.1}; TaxID=393595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax bork
Displaying 28 items

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