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scnpilot_expt_750_bf_scaffold_929_10

Organism: SCNPILOT_EXPT_750_BF_Burkholderiales_66_490

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 5767..7956

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 729.0
  • Bit_score: 1322
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 729.0
  • Bit_score: 1322
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax sp. (strain JS42) RepID=RPOB_ACISJ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 729.0
  • Bit_score: 1321
  • Evalue 0.0

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2190
GTGAGCGCGCGCGAGCAGGGCGAATCGACGCTGGTGTCGGCTGACCGCGTGCAGTACATGGACGTCTCGCCCGCGCAGATCGTCTCGGTCGCGGCATCTCTCGTGCCCTTCCTGGAGCACAACGACGCCAACCGCGCCTTGATGGGCGCCAACATGTCGCGTCAGGCCGTGCCGGTACTGCGGCCCGAAAAGCCTCTCGTGGGCACGGGCATCGAGCGTGTGGCGGCCGTGGACTCGGGCACCGTGGTGGTGGCCGAGCGCGGCGGCATCGTCGATTACGTCGATGCCACGCGCATCGTGATTCGCGTGCACGATGACGAGGCGGTGGCCGGCGAGGTGGGCGTGGACATCTACAACCTCATCAAGTACCAGCGTTCCAACCAGAACACCAACATCCACCAGCGTCCCATCGTCAAGAAGGGCGATGTGCTGGGCAAGGGCGACGTGATCGCCGACGGCGCTTCGACCGACCTGGGCGAGATTGCGATCGGGCAGAACATGCTGATCGCCTTCATGCCCTGGAATGGCTACAACTTCGAGGACTCGATCCTGATCAACGAGAAGGTCGTGGCCGACGACCGCTACACCAGCGTGCACATCGAGGAGCTGGTGGTGATGGCGCGCGACACCAAGCTCGGTGCCGAGGAAATCACGCGCGACATTCCCAACCTCTCGGAGCAGCAGCTCAATCGCCTGGACGACTCGGGCATCATCTACGTGGGCGCCGAGGTGCAACCCGGCGACACGCTGGTGGGCAAGGTCACGCCCAAGGGCGAGACCACGCTGACGCCGGAGGAAAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCCAGCGACGTGAAGGACACGTCGCTGCGCGTCGAGCAGGGCTCGCAGGGCACGGTGATCGACGTGCAGGTGTTCACCCGCGAGGGTATCCAGCGCGACAAGCGCGCGCAGCAGATCATCGACGACGAGCTCAAGCGCTACCGCCTGGACTTGAACGACCGTCTGCGCATCGTCGAGGCCGACGCGTTCGACCGCATCGAGAAGCTGCTGGTGGGCAAGGTGGCCAACGGCGGGCCGAACAAGCTCGCCAAGGGCAGCAAGATCGACAAGGCCTATCTCGCCAGCGTCGAGCGCTTTCACTGGTTCGACATCCGCCTGGCCGACGATACGGTGGCCGCGCAGCTCGAATCGATGAAGAACGCGATGGAGCACACGCGCCACGAGTTCGACCTCGCCTTCGAGGAAAAGAGGAAGAAGCTCACGCAGGGCGACGAGCTGCCCGCGGGCGTGCTCAAGATGGTCAAGGTGTACCTCGCCGTCAAGCGCCGCCTGCAGCCCGGCGACAAGATGGCCGGGCGCCACGGCAACAAGGGCGTGGTCTCCAAGATCGTGCCGGTCGAGGACATGCCCTACATGGAAGACGGTACGCCGGCCGACATCGTGCTCAATCCGCTGGGCGTGCCCTCGCGGATGAACATCGGGCAGGTGCTGGAGGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCAGCGCATCGCCGACATGATCGAGCGCGAGGCCAAGGCGGCCGAGGTGCGCAAGTACATCGAGCACATCTACAACGCGCGCGGCCGCAAGGAAGACCTGGCGCAGCTCGACGACGCCGCGCTCATGGCGATGGCGCAGGAGCTCAAGAAGGGCGTGCCCTTTGCGTCTCCGGTGTTCGACGGCGCTTCGGAAGAAGAGATCAAGGAGATGCTGCAGCTGGCCTACCCGGAAGAGGTGGCCAAGGCCAAGGGCCTCACGGCCCCGCGCACGCAGGCCTGGCTGTACGACGGGCGTACCGGCGAGCGCTTCGAGCGTCCGACGACGATCGGCTACATGCACTACCTGAAGCTGCACCACCTGGTCGACGACAAGATGCACGCGCGCTCCACCGGCCCTTACTCGCTGGTGACACAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGTTTCGGCGAGATGGAAGTGTGGGCGCTGGAAGCTTACGGCGCCGCCTACGTGCTGCAGGAAATGCTCACCGTCAAGTCCGACGACGTGCAGGGCCGCACCAAGGTGTACGAGAGCATCGTCAAGGGCGAGCACTCGATCGAAGCGGGCATGCCCGAGTCGTTCAACGTGCTGATCAAGGAAATCCGCTCGCTGGGGCTGGACATCGAGATGGACCGCTCCTGA
PROTEIN sequence
Length: 730
VSAREQGESTLVSADRVQYMDVSPAQIVSVAASLVPFLEHNDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAVDSGTVVVAERGGIVDYVDATRIVIRVHDDEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKKGDVLGKGDVIADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILINEKVVADDRYTSVHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDDSGIIYVGAEVQPGDTLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVEQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDRLRIVEADAFDRIEKLLVGKVANGGPNKLAKGSKIDKAYLASVERFHWFDIRLADDTVAAQLESMKNAMEHTRHEFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPADIVLNPLGVPSRMNIGQVLEVHLGWAAKGLGQRIADMIEREAKAAEVRKYIEHIYNARGRKEDLAQLDDAALMAMAQELKKGVPFASPVFDGASEEEIKEMLQLAYPEEVAKAKGLTAPRTQAWLYDGRTGERFERPTTIGYMHYLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYVLQEMLTVKSDDVQGRTKVYESIVKGEHSIEAGMPESFNVLIKEIRSLGLDIEMDRS*