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scnpilot_expt_750_bf_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 276 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_88_1
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364AE86
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:EHO40542.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
scnpilot_expt_750_bf_scaffold_88_2
unknown

Not on your lists

226..795
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_88_3
unknown

Not on your lists

792..1256
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_88_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1612..2577
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y456_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05499.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_expt_750_bf_scaffold_88_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2674..5283
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZC4_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:ERJ60605.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
scnpilot_expt_750_bf_scaffold_88_6
unknown

Not on your lists

comp(5786..6001)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_88_7
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6041..7774)
DNA (1734bp) protein (578aa)
OmpA/MotB domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SES4_PEDSD rbh
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADY52990.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedo
scnpilot_expt_750_bf_scaffold_88_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8081..8956
DNA (876bp) protein (292aa)
Pirin domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQ48_EMTOG rbh
Pirin domain protein
Pirin domain protein {ECO:0000313|EMBL:AFK01801.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 174
scnpilot_expt_750_bf_scaffold_88_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8995..9675)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000379C431
Phospholipid phosphatase {ECO:0000313|EMBL:KIC94621.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
hypothetical protein
scnpilot_expt_750_bf_scaffold_88_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9737..11821)
DNA (2085bp) protein (695aa)
Sulfatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THF6_NIAKG
sulfatase
Sulfatase {ECO:0000313|EMBL:AEW02802.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 176
scnpilot_expt_750_bf_scaffold_88_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11886..13172)
DNA (1287bp) protein (429aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3X3_HALH1 rbh
integral membrane sensor signal transduction histidine kinase rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEE49690.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Halisc
scnpilot_expt_750_bf_scaffold_88_12
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13169..13837)
DNA (669bp) protein (223aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3X4_HALH1
Cell cycle response regulator CtrA {ECO:0000313|EMBL:CEJ69305.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chrys
winged helix family two component transcriptional regulator
scnpilot_expt_750_bf_scaffold_88_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13945..14847
DNA (903bp) protein (301aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD8_NIAKG
flavin reductase domain-containing FMN-binding protein
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:AEW02784.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" s
scnpilot_expt_750_bf_scaffold_88_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15037..15753)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG16_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57999.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_expt_750_bf_scaffold_88_15
unknown

Not on your lists

15900..16349
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_88_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16414..17964
DNA (1551bp) protein (517aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI0003665B16 rbh
lysyl-tRNA synthetase rbh
scnpilot_expt_750_bf_scaffold_88_17
unknown

Not on your lists

comp(18050..19735)
DNA (1686bp) protein (562aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_88_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19903..20697
DNA (795bp) protein (265aa)
Regulatory protein LuxR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3I6_PEDHD
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ACU03265.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_expt_750_bf_scaffold_88_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20676..21491
DNA (816bp) protein (272aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7U2_9SPHI
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EHQ30428.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;
scnpilot_expt_750_bf_scaffold_88_20
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21571..21849)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HRL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAZ82486.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis
hypothetical protein
scnpilot_expt_750_bf_scaffold_88_21
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(22058..22879)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FD459
Predicted protein {ECO:0000313|EMBL:EDO26062.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (St
short-chain dehydrogenase
scnpilot_expt_750_bf_scaffold_88_22
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(23258..24247)
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
aldo/keto reductase
scnpilot_expt_750_bf_scaffold_88_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24321..24890)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17832.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_88_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25070..26503)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT02_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17831.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_88_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26475..27203)
DNA (729bp) protein (243aa)
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Baf family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00036C2A72 rbh
scnpilot_expt_750_bf_scaffold_88_26
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27246..27887)
DNA (642bp) protein (214aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG
Peptidase S16 {ECO:0000313|EMBL:KIC91172.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG62
peptidase S16 lon domain-containing protein
scnpilot_expt_750_bf_scaffold_88_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27992..28960
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B2E26 rbh
Transporter {ECO:0000313|EMBL:KIC95156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae
transporter
scnpilot_expt_750_bf_scaffold_88_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28988..30121
DNA (1134bp) protein (378aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:ACT94572.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ACT94572.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytoph
UDP-galactopyranose mutase n=1 Tax=Segetibacter koreensis RepID=UPI0003740A1F rbh
UDP-galactopyranose mutase
scnpilot_expt_750_bf_scaffold_88_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30126..31061
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GF56_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA88067.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;
glycosyltransferase
scnpilot_expt_750_bf_scaffold_88_30
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31081..31887
DNA (807bp) protein (269aa)
Glycosyl transferase, family 2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB14_9SPHI
Two-domain glycosyltransferase {ECO:0000313|EMBL:GAE82615.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticuloter
glycosyl transferase family 2
Displaying items 1-30 of 276 in total

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