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scnpilot_expt_750_bf_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_146_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123..863)
DNA (741bp) protein (247aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
Beta-lactamase {ECO:0000313|EMBL:KIC94558.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisil
beta-lactamase
scnpilot_expt_750_bf_scaffold_146_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(882..2222)
DNA (1341bp) protein (447aa)
cell cycle protein n=1 Tax=Niabella aurantiaca RepID=UPI0003701662
cell cycle protein
Cell cycle protein {ECO:0000313|EMBL:AHF15714.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_expt_750_bf_scaffold_146_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2219..4324)
DNA (2106bp) protein (702aa)
peptidoglycan glycosyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI00035DB774 rbh
peptidoglycan glycosyltransferase
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AHF15715.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella sol
scnpilot_expt_750_bf_scaffold_146_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4452..4988)
DNA (537bp) protein (179aa)
Rod shape-determining protein MreD n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF1_9SPHI
rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AHF15716.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella so
scnpilot_expt_750_bf_scaffold_146_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4985..5860)
DNA (876bp) protein (292aa)
Rod shape-determining protein MreC n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF2_9SPHI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17684.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_146_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5948..6973)
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF3_9SPHI rbh
cell shape-determining protein MreB rbh
Cell shape-determining protein MreB {ECO:0000313|EMBL:AHF15717.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella s
scnpilot_expt_750_bf_scaffold_146_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7341..8450)
DNA (1110bp) protein (370aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI000365ED94
tryptophan 23-dioxygenase
scnpilot_expt_750_bf_scaffold_146_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8483..9793)
DNA (1311bp) protein (437aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase n=1 Tax=Niabella aurantiaca RepID=UPI000368110D rbh
phosphoribosylamine--glycine ligase
scnpilot_expt_750_bf_scaffold_146_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9946..11604
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CAEE8 rbh
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:ACU57697.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophag
scnpilot_expt_750_bf_scaffold_146_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11709..13349
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F513F rbh
amino acid/peptide transporter (peptide:H symporter)
Amino acid/peptide transporter (Peptide:H symporter) {ECO:0000313|EMBL:AFD06526.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.
scnpilot_expt_750_bf_scaffold_146_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13470..15527
DNA (2058bp) protein (686aa)
Oligopeptide transporter, OPT family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD75_CHIPD
oligopeptide transporter
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:ACU57698.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chiti
scnpilot_expt_750_bf_scaffold_146_12
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15762..16205
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ21899.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
scnpilot_expt_750_bf_scaffold_146_13
unknown

Not on your lists

16227..16730
DNA (504bp) protein (168aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_146_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17128..18327)
DNA (1200bp) protein (400aa)
twin-arginine translocation pathway signal n=1 Tax=Niabella aurantiaca RepID=UPI00036B586D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01986.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_146_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18356..19807)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003821247
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF16409.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_146_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19917..20228)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003731CFE
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AHF16554.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_expt_750_bf_scaffold_146_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20304..20648)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRF6_9SPHI
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AHF16554.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_expt_750_bf_scaffold_146_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20831..22102)
DNA (1272bp) protein (424aa)
Seryl-tRNA synthetase {ECO:0000313|EMBL:AEW01983.1}; EC=6.1.1.11 {ECO:0000313|EMBL:AEW01983.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
Seryl-tRNA synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMJ5_NIAKG
seryl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_146_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22266..22529
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035ED83B
Uncharacterized protein {ECO:0000313|EMBL:KIC96093.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_146_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22722..23429
DNA (708bp) protein (236aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Niabella soli DSM 19437 RepID=H1NPX1_9SPHI
peptidylprolyl isomerase
Peptidylprolyl isomerase {ECO:0000313|EMBL:AHF14895.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 194
scnpilot_expt_750_bf_scaffold_146_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23560..26022)
DNA (2463bp) protein (821aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK04_NIAKG rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW02942.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
scnpilot_expt_750_bf_scaffold_146_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26203..26580
DNA (378bp) protein (126aa)
glycine cleavage system protein H n=1 Tax=Niabella aurantiaca RepID=UPI00036BDE24
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
scnpilot_expt_750_bf_scaffold_146_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26651..27055
DNA (405bp) protein (135aa)
VanZ family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQS9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17753.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_146_24

Not on your lists

comp(27542..28174)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037087A7
Uncharacterized protein {ECO:0000313|EMBL:AIA19131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_146_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28284..29351)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NRH1_9SPHI rbh
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Ch
scnpilot_expt_750_bf_scaffold_146_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29433..30584
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003809E8D rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEW01974.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DS
scnpilot_expt_750_bf_scaffold_146_27
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30598..32526
DNA (1929bp) protein (643aa)
yhjA; cytochrome C peroxidase (EC:1.11.1.5)
Possible cytochrome C peroxidase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11QF6_CYTH3 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAL86193.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_expt_750_bf_scaffold_146_28
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32776..33135
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL86194.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_expt_750_bf_scaffold_146_29
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33136..33861)
DNA (726bp) protein (242aa)
DNA repair protein RecO n=1 Tax=Niabella soli DSM 19437 RepID=H1NRG9_9SPHI
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphi
scnpilot_expt_750_bf_scaffold_146_30
unknown

Not on your lists

comp(33995..34864)
DNA (870bp) protein (290aa)

This feature has no annotations

Displaying items 1-30 of 137 in total

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