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scnpilot_expt_750_bf_scaffold_511

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_511_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

236..694
DNA (459bp) protein (153aa)
17 kDa surface antigen n=1 Tax=Niabella soli DSM 19437 RepID=H1NKU9_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17161.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
scnpilot_expt_750_bf_scaffold_511_2
unknown

Not on your lists

811..1431
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255AAE3
hypothetical protein
scnpilot_expt_750_bf_scaffold_511_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1566..2723)
DNA (1158bp) protein (386aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6W1_DYAFD rbh
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACT96172.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dy
scnpilot_expt_750_bf_scaffold_511_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2748..3233)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCS5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61424.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_expt_750_bf_scaffold_511_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3270..3863)
DNA (594bp) protein (198aa)
Metal dependent phosphohydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNG1_CHIPD
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACU62371.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinoph
scnpilot_expt_750_bf_scaffold_511_6
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3873..4232)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E22F
Ferredoxin {ECO:0000313|EMBL:KGO08470.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chrys
hypothetical protein
scnpilot_expt_750_bf_scaffold_511_7
alpha proteobacterium HIMB59, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4294..4905
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium HIMB59 RepID=J9YY83_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS48513.1}; TaxID=744985 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae.;" source="alpha proteobacterium HIMB59.
scnpilot_expt_750_bf_scaffold_511_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

5016..5519
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000379A753
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40194.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
scnpilot_expt_750_bf_scaffold_511_9
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5576..6115
DNA (540bp) protein (180aa)
Phage Tail Collar domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCL2_FLAJ1
phage tail collar domain-containing protein
Phage Tail Collar domain protein {ECO:0000313|EMBL:ABQ07056.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacte
scnpilot_expt_750_bf_scaffold_511_10
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6127..6669
DNA (543bp) protein (181aa)
Phage Tail Collar domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCL1_FLAJ1
Tail protein {ECO:0000313|EMBL:KGO80274.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-
phage tail collar domain-containing protein
scnpilot_expt_750_bf_scaffold_511_11
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6692..7237
DNA (546bp) protein (182aa)
Phage Tail Collar domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCL0_FLAJ1
phage tail collar domain-containing protein
Phage Tail Collar domain protein {ECO:0000313|EMBL:ABQ07054.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacte
scnpilot_expt_750_bf_scaffold_511_12
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

7246..8400
DNA (1155bp) protein (385aa)
ABC transporter substrate-binding protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IB12_FLUTR
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_511_13
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8397..9332
DNA (936bp) protein (312aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavoba
Formyl transferase domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCL4_FLAJ1
formyl transferase domain-containing protein
scnpilot_expt_750_bf_scaffold_511_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9461..11680
DNA (2220bp) protein (740aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THK1_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97429.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
scnpilot_expt_750_bf_scaffold_511_15
unknown

Not on your lists

11756..12244
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_511_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12318..13997
DNA (1680bp) protein (560aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
Glutamine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE4_NIAKG rbh
glutaminyl-tRNA synthetase
scnpilot_expt_750_bf_scaffold_511_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14069..15148)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT24_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59063.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_expt_750_bf_scaffold_511_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15145..16740)
DNA (1596bp) protein (532aa)
Twin-arginine translocation pathway signal n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT25_CHIPD
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ACU59064.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chit
scnpilot_expt_750_bf_scaffold_511_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16737..18263)
DNA (1527bp) protein (509aa)
Spermidine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT26_CHIPD rbh
spermidine synthase
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=48
scnpilot_expt_750_bf_scaffold_511_20
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18265..18468)
DNA (204bp) protein (68aa)
PF03994 domain protein n=1 Tax=Porphyromonas gingivalis JCVI SC001 RepID=T2NCM6_PORGN
PF03994 domain protein {ECO:0000313|EMBL:EOA11072.1}; TaxID=1195243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis
hypothetical protein
scnpilot_expt_750_bf_scaffold_511_21
unknown

Not on your lists

comp(18485..18661)
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_511_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18658..20529)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT29_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59068.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_expt_750_bf_scaffold_511_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20526..20918)
DNA (393bp) protein (131aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chi
S-adenosylmethionine decarboxylase related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT30_CHIPD
S-adenosylmethionine decarboxylase
scnpilot_expt_750_bf_scaffold_511_24
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20988..21542)
DNA (555bp) protein (185aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1535750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycet
Probable RNA 2'-phosphotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ92_NIAKG
RNA 2'-phosphotransferase
scnpilot_expt_750_bf_scaffold_511_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21630..23087)
DNA (1458bp) protein (486aa)
Nicotinamide phosphoribosyltransferase {ECO:0000313|EMBL:AEW02110.1}; EC=2.4.2.12 {ECO:0000313|EMBL:AEW02110.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
Nicotinamide phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ96_NIAKG rbh
nicotinamide phosphoribosyltransferase
scnpilot_expt_750_bf_scaffold_511_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23099..24010)
DNA (912bp) protein (304aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ97_NIAKG rbh
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW02111.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain D
scnpilot_expt_750_bf_scaffold_511_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24087..24776)
DNA (690bp) protein (230aa)
NUDIX hydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQA1_NIAKG
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEW02115.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain D
scnpilot_expt_750_bf_scaffold_511_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24841..26433
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQA2_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02116.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_expt_750_bf_scaffold_511_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26443..27696
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D50EFB
hypothetical protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:ADY52048.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae;
scnpilot_expt_750_bf_scaffold_511_30
unknown

Not on your lists

28460..28582
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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