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scnpilot_expt_750_bf_scaffold_977_28

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 24245..25543

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0V8_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 428.0
  • Bit_score: 405
  • Evalue 7.40e-110
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 428.0
  • Bit_score: 405
  • Evalue 2.10e-110
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACU04885.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 428.0
  • Bit_score: 405
  • Evalue 1.00e-109

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1299
ATGAAATATAAAAAAATTGCTTTAATGACATTACTAAATAAAAATCTGTTACTTGGCATTTGCTTCATCGGTAGCTTAGTATTCGTCAGTTGTTCAGGGAAAACCAAGACTGAAGAAAAAACAACGGAAACCACTAAAACAGAGGAAGGCGAAGAAGGTATAGAGTTAACGCAGGCACAAATTGATGCGGTAGGCATTCAATTTGGTACTATTGAATTAAAGAACCTAACACAGGTAATAAAAGCAAGTGGTGAACTTGCGGTACCACCGCAGAACAGAGCAGATGTGAATGTGTTGGTAGGTGGTGTGATCAGGAAGATTTTTGTTATCGAAGGTCAATCAGTTAAAAAAGGACAAGCTCTTGCGTTGATAGAAAATGCAGATTTGGTTTCAATACAGCAGGGCTATTTGACAGCAAAAAATGCTTTCTCTTATACAGCAGCCGAGTTACAAAGGCAAAAGGAATTAGACGAAGCCAATGCAGGAATAAAGAAAAAGCTGCAGGAAGCACAAGCAAACTACAATACAGAAAAGGCAAGAATTACGACACTTGAAGCACAGCTAAGGCAGTTAGGCATCAACCCGGCTGCTGTATCAAATGGCAATATAGCTACACAGGTTCGTGTTAGCGCACCTATTAGCGGTACAGTAGGCCATATTATGGTAAACACTGGCGCTTCTGCCCAGCCGGGCAGTCCTCTCTTAGAAATTATTGACAACTCCCAAATTCACTGCGACCTGACGGTATTTGAAAAAGACTTGTTCAAGGTTAAAGCAGGTCAGAAAGTAATCTTTACACTTACCAATCAGGAAAACAGGGAAATAACAGGCAGGGTATATGGTGTCAATAAGTCTTTTGAGAATGAAAGCAAAGGAATTATTGTTCACTCTATCATTGAAAATCCAAGCGCTTACAAGCTGATACCAGGAATGTATGTTACTGCATTGATCAGTATAGGTAGTGAGCAGGTTACGGCCCTACCGGTAGAAGCAGTAGTTCAGTCAGAAGGTAAGAGTTACATTTTCGTTGTTGATGAAGAAGCTAAAGAAACTGTAGAAAAGAAAAAGGAGCCAAAAGAATCCGAAAGTAAAGAAGAAAAGAAAGAAGATGACGAAATGAAAGAAAGCAATGGGAAAACTTATCGCTTTAAGATGGTGGAAGTCATTACAGGTGTCAGTGAATTGGGTTATATCAAAATCACACCCGCAGGTGAAAATATAGGTAAACTTCAAGTGGTTGTGAAGGGCGCAAACTACATTCTGTCAAAAATTAAAGCAGGTGGTGAGGAAGAAGAATGA
PROTEIN sequence
Length: 433
MKYKKIALMTLLNKNLLLGICFIGSLVFVSCSGKTKTEEKTTETTKTEEGEEGIELTQAQIDAVGIQFGTIELKNLTQVIKASGELAVPPQNRADVNVLVGGVIRKIFVIEGQSVKKGQALALIENADLVSIQQGYLTAKNAFSYTAAELQRQKELDEANAGIKKKLQEAQANYNTEKARITTLEAQLRQLGINPAAVSNGNIATQVRVSAPISGTVGHIMVNTGASAQPGSPLLEIIDNSQIHCDLTVFEKDLFKVKAGQKVIFTLTNQENREITGRVYGVNKSFENESKGIIVHSIIENPSAYKLIPGMYVTALISIGSEQVTALPVEAVVQSEGKSYIFVVDEEAKETVEKKKEPKESESKEEKKEDDEMKESNGKTYRFKMVEVITGVSELGYIKITPAGENIGKLQVVVKGANYILSKIKAGGEEEE*