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scnpilot_expt_750_bf_scaffold_977

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_977_1
unknown

Not on your lists

3..200
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_977_2
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(130..879)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI000364D232
Uncharacterized protein {ECO:0000313|EMBL:KGO78798.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
scnpilot_expt_750_bf_scaffold_977_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(884..2002)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTE0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK57041.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_4
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2180..2728
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KK86_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA88717.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (st
scnpilot_expt_750_bf_scaffold_977_5
unknown

Not on your lists

2789..3193
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_977_6
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3430..4236)
DNA (807bp) protein (269aa)
PRTRC system ThiF family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS05_9SPHI
thiamine biosynthesis protein ThiF
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AIM38412.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
scnpilot_expt_750_bf_scaffold_977_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4233..4949)
DNA (717bp) protein (239aa)
PRTRC system protein B n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNK0_9SPHI
PRTRC system protein B {ECO:0000313|EMBL:EFK57497.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacte
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4960..6114)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037ADFFE
Uncharacterized protein {ECO:0000313|EMBL:CDS91603.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_9
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6132..6350)
DNA (219bp) protein (73aa)
PRTRC system protein C n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5D6_9FLAO
PRTRC system protein C {ECO:0000313|EMBL:EFK33158.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium g
PRTRC system protein C
scnpilot_expt_750_bf_scaffold_977_10
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6369..6962)
DNA (594bp) protein (198aa)
Prtrc system protein e n=1 Tax=Flavobacterium sp. F52 RepID=J1KVW9_9FLAO
prtrc system protein e
Prtrc system protein e {ECO:0000313|EMBL:AIM38416.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
scnpilot_expt_750_bf_scaffold_977_11
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7028..7261)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS69_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16721.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (stra
scnpilot_expt_750_bf_scaffold_977_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7273..7650)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24275.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7707..8780)
DNA (1074bp) protein (358aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS12_9SPHI
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:EEI94377.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sou
phage/plasmid-related protein tigr03299
scnpilot_expt_750_bf_scaffold_977_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8820..9236)
DNA (417bp) protein (139aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS13_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteria
single-strand binding protein
scnpilot_expt_750_bf_scaffold_977_15
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9770..10141
DNA (372bp) protein (124aa)
Regulatory protein ArsR n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C0Y9_SPHS2
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADZ76800.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
scnpilot_expt_750_bf_scaffold_977_16
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10138..10755
DNA (618bp) protein (206aa)
Heavy metal transport/detoxification protein n=1 Tax=Galbibacter marinus RepID=K2PQQ2_9FLAO
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EKF53819.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="G
mercuric transport protein
scnpilot_expt_750_bf_scaffold_977_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11024..12682)
DNA (1659bp) protein (553aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80778.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacter
type IV secretory pathway VirD4 components-like protein
scnpilot_expt_750_bf_scaffold_977_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12858..14282)
DNA (1425bp) protein (475aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP0_ZUNPS
relaxase/mobilization nuclease Tax=GWF2_Bacteroidetes_43_11_curated
relaxase/mobilization nuclease
scnpilot_expt_750_bf_scaffold_977_19
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14270..14659)
DNA (390bp) protein (130aa)
Mobilisation protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP1_ZUNPS
Mobilization protein {ECO:0000313|EMBL:KGO80780.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibue
mobilisation protein
scnpilot_expt_750_bf_scaffold_977_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14900..15796)
DNA (897bp) protein (299aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase {ECO:0000313|EMBL:KFC59169.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
DNA primase
scnpilot_expt_750_bf_scaffold_977_21
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15954..16241
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVN9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA82526.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_22
unknown

Not on your lists

comp(16361..16798)
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_977_23
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16912..17130)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036AAE55
Uncharacterized protein {ECO:0000313|EMBL:KGO80784.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_24
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17147..18094)
DNA (948bp) protein (316aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS72_LEAB4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21417.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
transposase is204/is1001/is1096/is1165 family protein
scnpilot_expt_750_bf_scaffold_977_25
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18117..18470)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZ23_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95229.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_expt_750_bf_scaffold_977_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18844..19257
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002EB9B07
hypothetical protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=GWF2_Bacteroidetes_41_31_curated
Fe2+/Zn2+ uptake regulation protein
scnpilot_expt_750_bf_scaffold_977_27
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19867..24243
DNA (4377bp) protein (1459aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0V7_PEDHD rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU04884.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedo
CzcA family heavy metal efflux pump
scnpilot_expt_750_bf_scaffold_977_28
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24245..25543
DNA (1299bp) protein (433aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0V8_PEDHD
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACU04885.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" sourc
scnpilot_expt_750_bf_scaffold_977_29
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

25646..26260
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003692BE9
Uncharacterized protein {ECO:0000313|EMBL:KIF30814.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_977_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

26271..28277
DNA (2007bp) protein (669aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWQ2_9SPHI
heavy metal translocating P-type ATPase
Displaying items 1-30 of 35 in total

View Taxonomy