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scnpilot_expt_750_bf_scaffold_2728

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2728_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..368)
DNA (366bp) protein (122aa)
nuoL; NADH dehydrogenase I subunit L (EC:1.6.5.3); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoL; NADH dehydrogenase I subunit L (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Thiobacillus thioparus RepID=UPI000376A927
scnpilot_expt_750_bf_scaffold_2728_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(368..673)
DNA (306bp) protein (102aa)
nuoK; NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoK; NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Thiobacillus thioparus RepID=UPI00035DC278
scnpilot_expt_750_bf_scaffold_2728_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(670..1311)
DNA (642bp) protein (214aa)
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
nuoJ; NADH dehydrogenase I subunit J (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Thiobacillus thioparus RepID=UPI00035F54A1 rbh
scnpilot_expt_750_bf_scaffold_2728_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1321..1752)
DNA (432bp) protein (144aa)
nuoI; NADH dehydrogenase subunit I (EC:1.6.5.3); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=GWE1_Thiobacillus_62_9_curated
nuoI; NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH dehydrogenase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI0003768864
scnpilot_expt_750_bf_scaffold_2728_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..2964)
DNA (966bp) protein (322aa)
nuoH; NADH dehydrogenase I subunit H (EC:1.6.5.3); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoH; NADH dehydrogenase I subunit H (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Thiobacillus thioparus RepID=UPI0003756AFD
scnpilot_expt_750_bf_scaffold_2728_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2964..5318)
DNA (2355bp) protein (785aa)
nuoG; NADH dehydrogenase subunit G (EC:1.6.5.3); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWE1_Thiobacillus_62_9_curated
nuoG; NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=1 Tax=Thiobacillus thioparus RepID=UPI00036A5707 rbh
scnpilot_expt_750_bf_scaffold_2728_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5332..6612)
DNA (1281bp) protein (427aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.5.3)
NADH-quinone oxidoreductase, chain F {ECO:0000313|EMBL:AAZ97100.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AAZ97100.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy
NADH dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003611539 rbh
scnpilot_expt_750_bf_scaffold_2728_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6609..7082)
DNA (474bp) protein (158aa)
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=GWE1_Thiobacillus_62_9_curated
nuoE; NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase I chain E id=1326638 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
scnpilot_expt_750_bf_scaffold_2728_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7082..7966)
DNA (885bp) protein (295aa)
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D n=1 Tax=Thiobacillus thioparus RepID=UPI000382DA3E
scnpilot_expt_750_bf_scaffold_2728_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7963..8265)
DNA (303bp) protein (101aa)
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=GWE1_Thiobacillus_62_9_curated
nuoD; NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D n=1 Tax=Thiobacillus thioparus RepID=UPI000382DA3E
scnpilot_expt_750_bf_scaffold_2728_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8265..8864)
DNA (600bp) protein (200aa)
nuoC; NADH dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoC; NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH dehydrogenase subunit C n=1 Tax=Thiobacillus thioparus RepID=UPI0003629828 rbh
scnpilot_expt_750_bf_scaffold_2728_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8875..9351)
DNA (477bp) protein (159aa)
nuoB; NADH dehydrogenase subunit B (EC:1.6.5.3); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=GWE1_Thiobacillus_62_9_curated
nuoB; NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH dehydrogenase subunit B n=1 Tax=Thiobacillus thioparus RepID=UPI000379C27C rbh
scnpilot_expt_750_bf_scaffold_2728_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9360..9716)
DNA (357bp) protein (119aa)
nuoA; NADH dehydrogenase I subunit A (EC:1.6.5.3); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nuoA; NADH dehydrogenase I subunit A (EC:1.6.5.3)
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI0003763F50
scnpilot_expt_750_bf_scaffold_2728_trna_1
unknown

Not on your lists

comp(9881..9962)
DNA (82bp)
transferRNA
scnpilot_expt_750_bf_scaffold_2728_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9995..10351)
DNA (357bp) protein (119aa)
preprotein translocase subunit SecG n=1 Tax=Thiobacillus thioparus RepID=UPI000372C4E1
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=GWE1_Thiobacillus_62_9_curated
secG; preprotein translocase subunit SecG
scnpilot_expt_750_bf_scaffold_2728_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10375..10758)
DNA (384bp) protein (128aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tpiA; triosephosphate isomerase (EC:5.3.1.1)
triosephosphate isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A5A75
Displaying 16 items

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