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scnpilot_expt_750_bf_scaffold_4092

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_4092_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..222
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FB1A4
hypothetical protein; K02116 ATP synthase protein I Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_4092_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

309..1151
DNA (843bp) protein (281aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP synthase F0F1 subunit A (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI00037E5410 rbh
scnpilot_expt_750_bf_scaffold_4092_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1230..1469
DNA (240bp) protein (80aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] id=12494013 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP synthase F0F1 subunit C (EC:3.6.3.14)
scnpilot_expt_750_bf_scaffold_4092_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1522..1992
DNA (471bp) protein (157aa)
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b id=1324843 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
scnpilot_expt_750_bf_scaffold_4092_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1996..2532
DNA (537bp) protein (179aa)
F-type H+-transporting ATP synthase, delta (OSCP) subunit (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
F-type H+-transporting ATP synthase, delta (OSCP) subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Thiobacillus thioparus RepID=UPI000371DC6F rbh
scnpilot_expt_750_bf_scaffold_4092_6
RIFOXYD2_FULL_Sideroxydans_59_7_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3159..3311)
DNA (153bp) protein (51aa)
Tax=RIFOXYD2_FULL_Sideroxydans_59_7_curated
scnpilot_expt_750_bf_scaffold_4092_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3509..4042
DNA (534bp) protein (178aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
F0F1 ATP synthase subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00035C5B74
scnpilot_expt_750_bf_scaffold_4092_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4072..4944
DNA (873bp) protein (291aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=GWE1_Thiobacillus_62_9_curated
ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
F0F1 ATP synthase subunit gamma n=1 Tax=Thiobacillus thioparus RepID=UPI0003781A2F rbh
scnpilot_expt_750_bf_scaffold_4092_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5000..6379
DNA (1380bp) protein (460aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ATPB_THIDA
scnpilot_expt_750_bf_scaffold_4092_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6454..6876
DNA (423bp) protein (141aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
F0F1 ATP synthase subunit epsilon n=1 Tax=Thiobacillus thioparus RepID=UPI000360F07F
scnpilot_expt_750_bf_scaffold_4092_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7016..7384
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CF212
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_750_bf_scaffold_4092_12
unknown

Not on your lists

7562..7714
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_4092_13
unknown

Not on your lists

7797..7928
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_4092_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8100..8879
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000376FE64 rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AAZ98748.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour
scnpilot_expt_750_bf_scaffold_4092_15
unknown

Not on your lists

comp(9290..9943)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_4092_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10194..10358
DNA (165bp) protein (55aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AF355
scnpilot_expt_750_bf_scaffold_4092_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10493..11095
DNA (603bp) protein (201aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003786011
Displaying 17 items

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