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scnpilot_expt_750_bf_scaffold_1014

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1014_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E57DF
ABC-type transport system periplasmic component Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC-type transport system periplasmic component
scnpilot_expt_750_bf_scaffold_1014_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297..704)
DNA (408bp) protein (136aa)
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
Putative uncharacterized protein id=1351335 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(731..1465)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003769227
ABC-type transport system permease Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC-type transport system permease
scnpilot_expt_750_bf_scaffold_1014_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1511..2008
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F2598
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2008..2940
DNA (933bp) protein (311aa)
peptidase n=1 Tax=Thiobacillus thioparus RepID=UPI00036AAE2F rbh
TPR repeat-containing Zn-dependent protease Tax=GWE1_Thiobacillus_62_9_curated
TPR repeat-containing Zn-dependent protease
scnpilot_expt_750_bf_scaffold_1014_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2937..5153
DNA (2217bp) protein (739aa)
adenylyl cyclase class-3/4/guanylyl cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D5E32 rbh
adenylyl cyclase class-3/4/guanylyl cyclase
scnpilot_expt_750_bf_scaffold_1014_7
unknown

Not on your lists

comp(5138..5395)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1014_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6556..7590)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BEECF rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7679..8410)
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein id=12493386 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8463..9158)
DNA (696bp) protein (232aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] id=12493385 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
multi-sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
scnpilot_expt_750_bf_scaffold_1014_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9158..10927)
DNA (1770bp) protein (590aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003727311 rbh
Multi-sensor Hybrid Histidine Kinase {ECO:0000313|EMBL:AAZ96940.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thioba
scnpilot_expt_750_bf_scaffold_1014_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10932..11999)
DNA (1068bp) protein (356aa)
transport system ATPase; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
iron ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361E804 rbh
transport system ATPase
scnpilot_expt_750_bf_scaffold_1014_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12006..13595)
DNA (1590bp) protein (530aa)
FeT family ferric iron ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI00037BF0E1 rbh
iron transport system permease; K02011 iron(III) transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
iron transport system permease
scnpilot_expt_750_bf_scaffold_1014_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13684..14691)
DNA (1008bp) protein (336aa)
iron deficiency-induced protein A n=1 Tax=Thiobacillus thioparus RepID=UPI00036CCB4B rbh
ABC transporter iron binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter iron binding protein
scnpilot_expt_750_bf_scaffold_1014_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14839..15315)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D4465
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15391..16080
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003683F5E rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16219..17898
DNA (1680bp) protein (560aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-); K03688 ubiquinone biosynthesis protein Tax=GWE1_Thiobacillus_62_9_curated
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
ubiquinone biosynthesis protein UbiB n=1 Tax=Thiobacillus thioparus RepID=UPI0003659501 rbh
scnpilot_expt_750_bf_scaffold_1014_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17908..20181)
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381F7FE rbh
diguanylate cyclase/phosphodiesterase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_bf_scaffold_1014_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20178..21032)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370E788 rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21120..23102
DNA (1983bp) protein (661aa)
helicase C2; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
helicase n=1 Tax=Thiobacillus thioparus RepID=UPI0003725147 rbh
helicase c2
scnpilot_expt_750_bf_scaffold_1014_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24227..24892)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003641D3A rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1014_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24894..25853)
DNA (960bp) protein (320aa)
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
thioredoxin reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Thiobacillus thioparus RepID=UPI00035C6592 rbh
scnpilot_expt_750_bf_scaffold_1014_23
unknown

Not on your lists

comp(25883..26788)
DNA (906bp) protein (302aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1014_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26877..27452
DNA (576bp) protein (192aa)
cell division protein FtsK n=1 Tax=Thiobacillus thioparus RepID=UPI000371D004
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA translocase FtsK
Displaying 24 items

View Taxonomy