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scnpilot_expt_750_bf_scaffold_1046

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1046_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..431)
DNA (429bp) protein (143aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003755283
apolipoprotein N-acyltransferase
scnpilot_expt_750_bf_scaffold_1046_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(446..1726)
DNA (1281bp) protein (427aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dihydroorotase (EC:3.5.2.3)
dihydroorotase n=1 Tax=Thiobacillus thioparus RepID=UPI000373E098 rbh
scnpilot_expt_750_bf_scaffold_1046_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1723..2676)
DNA (954bp) protein (318aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=12494052 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2) rbh
Aspartate carbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000255|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000255|HAMAP-Rule:MF_00001}; Short=ATCase {ECO:0000255
scnpilot_expt_750_bf_scaffold_1046_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2673..3167)
DNA (495bp) protein (165aa)
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFOXYA1
bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00035F1DAF rbh
scnpilot_expt_750_bf_scaffold_1046_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3148..3585)
DNA (438bp) protein (146aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Holliday junction resolvase n=1 Tax=Thiobacillus thioparus RepID=UPI0003809387
Holliday junction resolvase-like protein
scnpilot_expt_750_bf_scaffold_1046_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3582..4139)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E31AB rbh
hypothetical protein; K07735 putative transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1046_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4227..5663
DNA (1437bp) protein (479aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
deoxyribodipyrimidine photo-lyase type I (EC:4.1.99.3)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035F52DB rbh
scnpilot_expt_750_bf_scaffold_1046_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5660..6304)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C5B7D rbh
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor Tax=GWE1_Thiobacillus_62_9_curated
acrR; TetR/AcrR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1046_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6400..7602
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003753A23 rbh
AcrA/E family efflux transporter MFP subunit; K03585 membrane fusion protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
AcrA/E family efflux transporter MFP subunit
scnpilot_expt_750_bf_scaffold_1046_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7612..10806
DNA (3195bp) protein (1065aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F9A27 rbh
hydrophobe/amphiphile efflux-1 family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hydrophobe/amphiphile efflux-1 family protein
scnpilot_expt_750_bf_scaffold_1046_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10993..13098
DNA (2106bp) protein (702aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037FE0A6 rbh
diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) {ECO:0000313|EMBL:AAZ98531.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophil
scnpilot_expt_750_bf_scaffold_1046_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13165..13443)
DNA (279bp) protein (93aa)
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] id=12496304 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000255|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000255|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000255|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
Displaying 12 items

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