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scnpilot_expt_750_bf_scaffold_1277

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1277_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2390)
DNA (2388bp) protein (796aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369C0E5 rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1277_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2387..3094)
DNA (708bp) protein (236aa)
ABC transporter ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F078C rbh
ABC transporter ATPase; K02003 putative ABC transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATPase
scnpilot_expt_750_bf_scaffold_1277_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4977..6575
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EFAFA
Ig family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig family protein
scnpilot_expt_750_bf_scaffold_1277_4
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6727..7653
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003729510
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1277_5
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7677..8570
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000366D48B
hypothetical protein Tax=CG_Delta_06
scnpilot_expt_750_bf_scaffold_1277_6
unknown

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8674..8958
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1277_7
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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9007..14970
DNA (5964bp) protein (1988aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367F83E
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEG00906.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source=
scnpilot_expt_750_bf_scaffold_1277_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15156..16406
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000369C5A0
RHS repeat-associated core domain-containing protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ParB-like nuclease domain-containing protein
scnpilot_expt_750_bf_scaffold_1277_trna_2
unknown

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comp(17663..17736)
DNA (74bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1277_trna_1
unknown

Not on your lists

comp(17772..17852)
DNA (81bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1277_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17992..18846
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=GWE1_Thiobacillus_62_9_c
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
methenyltetrahydrofolate cyclohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003648A7F rbh
scnpilot_expt_750_bf_scaffold_1277_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18853..19611)
DNA (759bp) protein (253aa)
CbbY n=1 Tax=Thiobacillus thioparus RepID=UPI00037E1710 rbh
HAD family hydrolase Tax=GWE1_Thiobacillus_62_9_curated
HAD family hydrolase
scnpilot_expt_750_bf_scaffold_1277_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19702..20121
DNA (420bp) protein (140aa)
molecular chaperone DnaK n=1 Tax=Thiobacillus thioparus RepID=UPI0003688EE9
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1277_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20227..20670
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382EBED rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1277_13
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20714..20947)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003824A24
putative signal peptide protein
Putative signal peptide protein {ECO:0000313|EMBL:AIY40385.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas a
scnpilot_expt_750_bf_scaffold_1277_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21118..21786
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381BF68 rbh
winged helix family two component transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
winged helix family two component transcriptional regulator
scnpilot_expt_750_bf_scaffold_1277_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21783..23177
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037464E3 rbh
two component transcriptional regulator, sensor histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
two component transcriptional regulator, sensor histidine kinase
scnpilot_expt_750_bf_scaffold_1277_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23226..23471)
DNA (246bp) protein (82aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
polynucleotide phosphorylase/polyadenylase n=1 Tax=Thiobacillus thioparus RepID=UPI00036D5EBA
polynucleotide phosphorylase
Displaying 18 items

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