ggKbase home page

scnpilot_expt_750_bf_scaffold_1299

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1299_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..289
DNA (288bp) protein (96aa)
recombinase RecA n=1 Tax=Thiobacillus thioparus RepID=UPI00037D51CF
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=292415 species="Bacteria; Proteobac
scnpilot_expt_750_bf_scaffold_1299_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273..746
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003726CC9
putative regulatory protein RecX; K03565 regulatory protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
regulatory protein RecX
scnpilot_expt_750_bf_scaffold_1299_3

Not on your lists

comp(736..1152)
DNA (417bp) protein (139aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1D7U0_9ZZZZ
PilT domain-containing protein {ECO:0000313|EMBL:EQD77489.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1299_4

Not on your lists

comp(1152..1487)
DNA (336bp) protein (112aa)
Prevent-host-death family protein n=1 Tax=mine drainage metagenome RepID=T1B1U8_9ZZZZ
Prevent-host-death family protein {ECO:0000313|EMBL:EQD62533.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
prevent-host-death family protein
scnpilot_expt_750_bf_scaffold_1299_5
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1487..1834)
DNA (348bp) protein (116aa)
transposase IS200 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B326DF
transposase IS200-family protein; K07491 putative transposase Tax=RBG_16_Gammaproteobacteria_57_12_curated
transposase
scnpilot_expt_750_bf_scaffold_1299_6
unknown

Not on your lists

2002..2364
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1299_7
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2392..2859)
DNA (468bp) protein (156aa)
fimbrial protein n=1 Tax=Neisseria lactamica RepID=UPI0002E9E421
Fimbrial protein {ECO:0000313|EMBL:EXB87815.1}; TaxID=1310639 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumann
Fimbrial protein pilin
scnpilot_expt_750_bf_scaffold_1299_8
unknown

Not on your lists

3421..3627
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1299_9
unknown

Not on your lists

3681..4502
DNA (822bp) protein (274aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1299_10

Not on your lists

comp(4530..6158)
DNA (1629bp) protein (543aa)
Marine sediment metagenome DNA, contig: S01H4_S11612 {ECO:0000313|EMBL:GAH00531.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
scnpilot_expt_750_bf_scaffold_1299_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6190..6561)
DNA (372bp) protein (124aa)
QacE-like protein; integron orf n=1 Tax=Janthinobacterium lividum RepID=UPI000289B9F7
QacE {ECO:0000313|EMBL:KGI79240.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
QacE-like protein; integron orf
scnpilot_expt_750_bf_scaffold_1299_12
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

6777..7685
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL96_METS0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1299_13
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7785..9095
DNA (1311bp) protein (437aa)
Replication initiation factor n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GL20_NITSI rbh
replication initiation factor
Replication initiation factor {ECO:0000313|EMBL:AEJ01793.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomon
scnpilot_expt_750_bf_scaffold_1299_14
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9313..10374
DNA (1062bp) protein (354aa)
integrase n=1 Tax=Methylotenera mobilis RepID=UPI0003810769 rbh
integrase family protein Tax=GWA2_Curvibacter_64_110_curated
integrase
scnpilot_expt_750_bf_scaffold_1299_trna_1
unknown

Not on your lists

comp(10404..10476)
DNA (73bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1299_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10555..10728)
DNA (174bp) protein (58aa)
Probable transmembrane protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGT9_THIDA
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98154.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
Displaying 16 items

View Taxonomy