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scnpilot_expt_750_bf_scaffold_1360

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1360_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..669)
DNA (669bp) protein (223aa)
iron-sulfur cluster-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
iron-sulfur cluster-binding protein id=12494810 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
(Fe-S)-binding protein
scnpilot_expt_750_bf_scaffold_1360_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(742..1662)
DNA (921bp) protein (307aa)
cytochrome C oxidase subunit III n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB899 rbh
cytochrome c oxidase cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome c oxidase cbb3-type subunit III
scnpilot_expt_750_bf_scaffold_1360_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1808..2554)
DNA (747bp) protein (249aa)
peptidase S41 n=1 Tax=Thiobacillus thioparus RepID=UPI000366DDED rbh
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbb3-type cytochrome c oxidase subunit II
scnpilot_expt_750_bf_scaffold_1360_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2574..3173)
DNA (600bp) protein (200aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000360046D
cbb3-type cytochrome c oxidase subunit I
scnpilot_expt_750_bf_scaffold_1360_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..3924)
DNA (810bp) protein (270aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000360046D
cbb3-type cytochrome c oxidase subunit I
scnpilot_expt_750_bf_scaffold_1360_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4045..4638)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364A64C rbh
putative SCO1/SenC family protein; K07152 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCO1/SenC family protein
scnpilot_expt_750_bf_scaffold_1360_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4635..5099)
DNA (465bp) protein (155aa)
BadM/Rrf2 family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Putative uncharacterized protein id=1308430 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
BadM/Rrf2 family transcriptional regulator
scnpilot_expt_750_bf_scaffold_1360_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..6080)
DNA (897bp) protein (299aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protoheme IX farnesyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A9E83 rbh
protoheme IX farnesyltransferase
scnpilot_expt_750_bf_scaffold_1360_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6083..7066)
DNA (984bp) protein (328aa)
cytochrome C oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000376613A rbh
putative cytochrome aa3 oxidase assembly protein; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome aa3 oxidase assembly protein
scnpilot_expt_750_bf_scaffold_1360_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7076..7639)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DB626 rbh
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
scnpilot_expt_750_bf_scaffold_1360_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7668..8405)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003639752 rbh
SURF1 family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SURF1 family protein
scnpilot_expt_750_bf_scaffold_1360_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8454..8654
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379082B
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1360_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8754..9620)
DNA (867bp) protein (289aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003788960 rbh
cytochrome c oxidase subunit III
scnpilot_expt_750_bf_scaffold_1360_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9651..9848)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381AF30
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1360_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9841..10395)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E22CE rbh
cytochrome c oxidase assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11 Tax=GWE1_Thiobacillus_62_9_curated
cytochrome C oxidase assembly protein
scnpilot_expt_750_bf_scaffold_1360_16
unknown

Not on your lists

comp(10399..10521)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1360_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10518..12098)
DNA (1581bp) protein (527aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWE1_Thiobacillus_62_9_curated
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI00037EC99B rbh
scnpilot_expt_750_bf_scaffold_1360_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12122..13285)
DNA (1164bp) protein (388aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=GWE1_Thiobacillus_62_9_curated
cytochrome c oxidase subunit II (EC:1.9.3.1)
cytochrome B559 subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD0DD rbh
Displaying 18 items

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