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scnpilot_expt_750_bf_scaffold_1500

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1500_1
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..223
DNA (222bp) protein (74aa)
Cytochrome C family protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWE2_LEPCP
cytochrome C family protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_expt_750_bf_scaffold_1500_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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677..2719
DNA (2043bp) protein (681aa)
sporulation domain-containing protein id=5082500 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
sporulation domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
sporulation domain-containing protein
scnpilot_expt_750_bf_scaffold_1500_3
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2745..3365
DNA (621bp) protein (207aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Heme exporter protein CcmA n=2 Tax=Allochromatium vinosum RepID=D3RVT2_ALLVD
heme exporter protein CcmA
scnpilot_expt_750_bf_scaffold_1500_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3378..4046
DNA (669bp) protein (223aa)
Heme exporter protein B n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZJQ3_9PROT
heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
heme exporter protein CcmB
scnpilot_expt_750_bf_scaffold_1500_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4090..4830
DNA (741bp) protein (247aa)
Heme exporter protein CcmC n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADK5_9PROT
heme exporter protein CcmC Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
heme exporter protein CcmC
scnpilot_expt_750_bf_scaffold_1500_6
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4827..5021
DNA (195bp) protein (65aa)
Heme exporter protein CcmD n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GEX9_NITSI
heme exporter protein CcmD; K02196 heme exporter protein D Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
heme exporter protein CcmD
scnpilot_expt_750_bf_scaffold_1500_7
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5005..5478
DNA (474bp) protein (158aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSA2_9PROT
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
CcmE/CycJ protein
scnpilot_expt_750_bf_scaffold_1500_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5475..7454
DNA (1980bp) protein (660aa)
Cytochrome c heme lyase subunit CcmF n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI48_9PROT
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
cytochrome c-type biogenesis protein CcmF
scnpilot_expt_750_bf_scaffold_1500_9
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7451..7981
DNA (531bp) protein (177aa)
Periplasmic protein thiol n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANR9_9PROT
periplasmic protein thiol Tax=CG_Beta_01
periplasmic protein thiol
scnpilot_expt_750_bf_scaffold_1500_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8079..8447
DNA (369bp) protein (123aa)
Cytochrome c heme lyase subunit CcmL n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI83_9PROT
c-type cytochromes biosynthesis protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
cytochrome C biogenesis protein
scnpilot_expt_750_bf_scaffold_1500_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8444..9745
DNA (1302bp) protein (434aa)
TPR repeat n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82WC1_NITEU
cycH; hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
TPR repeat
scnpilot_expt_750_bf_scaffold_1500_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9762..10523)
DNA (762bp) protein (254aa)
ubiB, aarF, yigQ, yigR; putative ubiquinone biosynthesis protein UbiB (EC:1.14.13.-); K03688 ubiquinone biosynthesis protein Tax=GWE1_Thiobacillus_62_9_curated
ubiB; ubiquinone biosynthesis protein UbiB (EC:1.14.13.-)
ubiquinone biosynthesis protein UbiB n=1 Tax=Thiobacillus thioparus RepID=UPI00036071B5
Displaying 12 items

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