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scnpilot_expt_750_bf_scaffold_1973

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1973_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..503)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BC2D8
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(460..1155)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369D3C1
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1953..2159)
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=1 Tax=Thiobacillus thioparus RepID=UPI00036EFB5F
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rpmE; 50S ribosomal protein L31
scnpilot_expt_750_bf_scaffold_1973_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2269..3456)
DNA (1188bp) protein (396aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 specie
transcription termination factor Rho n=1 Tax=Thiobacillus thioparus RepID=UPI00037BECBE
rho; transcription termination factor Rho
scnpilot_expt_750_bf_scaffold_1973_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3566..3892)
DNA (327bp) protein (109aa)
thioredoxin; K03671 thioredoxin 1 id=12495253 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thioredoxin; K03671 thioredoxin 1 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin
scnpilot_expt_750_bf_scaffold_1973_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4052..4375
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037C60C9
7Fe ferredoxin; K05524 ferredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
7Fe ferredoxin
scnpilot_expt_750_bf_scaffold_1973_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..7017
DNA (2637bp) protein (879aa)
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA helicase/exodeoxyribonuclease V subunit B (EC:3.1.11.5)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B0050 rbh
scnpilot_expt_750_bf_scaffold_1973_8
unknown

Not on your lists

comp(7301..7678)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1973_9
unknown

Not on your lists

comp(7724..8146)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1973_10
unknown

Not on your lists

comp(8168..8890)
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1973_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9136..10212
DNA (1077bp) protein (359aa)
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5); K01144 exodeoxyribonuclease V [EC:3.1.11.5] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA helicase/exodeoxyribonuclease V subunit A (EC:3.1.11.5)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036DA2E4
scnpilot_expt_750_bf_scaffold_1973_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10308..10781
DNA (474bp) protein (158aa)
methylase n=1 Tax=Thiobacillus thioparus RepID=UPI00037B0835
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11187
DNA (339bp) protein (113aa)
type 1 pili tip component n=1 Tax=Thiobacillus thioparus RepID=UPI00035CC962
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..11560
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003750AC4
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11625..12851
DNA (1227bp) protein (409aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFOXYA
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.35)
N-acetylglutamate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036F01C0 rbh
scnpilot_expt_750_bf_scaffold_1973_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12856..13341
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377ADB2 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..14642
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D9D9E rbh
GAF sensor protein Tax=GWE1_Thiobacillus_62_9_curated
putative GAF sensor protein
scnpilot_expt_750_bf_scaffold_1973_18
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14650..15645)
DNA (996bp) protein (332aa)
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:KFB65988.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KFB65988.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Ac
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036437C4 rbh
acoB1; acetoin dehydrogenase subunit beta
scnpilot_expt_750_bf_scaffold_1973_19
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15642..16622)
DNA (981bp) protein (327aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:KFB65987.1}; EC=1.1.1.- {ECO:0000313|EMBL:KFB65987.1};; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteob
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003674073 rbh
pdhA; pyruvate dehydrogenase E1 component (alpha subunit) oxidoreductase protein
scnpilot_expt_750_bf_scaffold_1973_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16619..17110)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A72BD rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1973_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17247..17609
DNA (363bp) protein (121aa)
ATPase AAA n=1 Tax=Thiobacillus thioparus RepID=UPI0003801883
ATPase
ATPase {ECO:0000313|EMBL:AAZ95981.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (str
Displaying 21 items

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