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scnpilot_expt_750_bf_scaffold_853

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_853_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_853_2
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

204..494
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JM05_ALCFA
DNA polymerase beta domain-containing protein
DNA polymerase beta domain-containing protein {ECO:0000313|EMBL:BAP89372.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium G
scnpilot_expt_750_bf_scaffold_853_3
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491..853
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82VK8_NITEU
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_4
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

847..1404
DNA (558bp) protein (186aa)
Resolvase domain protein n=5 Tax=Proteobacteria RepID=C5T7N6_ACIDE rbh
Site-specific DNA recombinase e14 prophage {ECO:0000313|EMBL:CDW95872.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
DNA invertase
scnpilot_expt_750_bf_scaffold_853_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1436..3163
DNA (1728bp) protein (576aa)
sodium:proton antiporter n=1 Tax=Cupriavidus sp. WS RepID=UPI0003757BCD rbh
TrkA-N:Sodium/hydrogen exchanger
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3181..4068)
DNA (888bp) protein (296aa)
Usp-like protein n=3 Tax=Azotobacter vinelandii RepID=C1DGW4_AZOVD rbh
Usp-like protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4095..6833)
DNA (2739bp) protein (913aa)
Cation transportingP-type ATPase n=3 Tax=Azotobacter vinelandii RepID=C1DGW3_AZOVD rbh
Cation transportingP-type ATPase
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7004..7888
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035F18B4 rbh
uspA; UspA
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7891..8091
DNA (201bp) protein (67aa)
Phage transcriptional regulator AlpA n=6 Tax=Pseudomonas RepID=L1M360_PSEPU
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:GAO23812.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
putative helicase
scnpilot_expt_750_bf_scaffold_853_10
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8088..8438
DNA (351bp) protein (117aa)
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_expt_750_bf_scaffold_853_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..9080)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE251
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47699.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_expt_750_bf_scaffold_853_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9643..10149)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA repair protein
scnpilot_expt_750_bf_scaffold_853_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10525..11463
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ rbh
transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_853_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11460..12329
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_853_15
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12495..13169
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA685 rbh
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
scnpilot_expt_750_bf_scaffold_853_16
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13174..14628
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9 rbh
heavy metal sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_853_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14708..15967)
DNA (1260bp) protein (420aa)
Major facilitator superfamily MFS_1 n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JU27_9GAMM rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEM47879.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;"
scnpilot_expt_750_bf_scaffold_853_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16064..16483)
DNA (420bp) protein (140aa)
Universal stress protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HNF0_PSEUO
UspA domain-containing protein Tax=CG_Hydro_01
UspA domain-containing protein
scnpilot_expt_750_bf_scaffold_853_19
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16480..17652)
DNA (1173bp) protein (391aa)
Glutathione-regulated potassium-proton antiporter n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMZ9_PSEUO
sodium/hydrogen exchanger Tax=GWA2_Gallionellales_60_142_curated
potassium transporter Kef
scnpilot_expt_750_bf_scaffold_853_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17662..18006)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H0C9_9GAMM
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_expt_750_bf_scaffold_853_21
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18018..18386)
DNA (369bp) protein (123aa)
Histidine triad (HIT) protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLX9_SIDLE
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADE12574.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans l
scnpilot_expt_750_bf_scaffold_853_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18383..18769)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GYQ4_9GAMM
crcB protein Tax=CG_Hydro_01
crcB protein
scnpilot_expt_750_bf_scaffold_853_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19276..20685
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F296B rbh
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG89161.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source
scnpilot_expt_750_bf_scaffold_853_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20682..21725
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036D4873 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89162.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_expt_750_bf_scaffold_853_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..24838
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003814170 rbh
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGG89163.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; R
scnpilot_expt_750_bf_scaffold_853_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25104..26009)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375ED32
putative phage integrase Tax=RBG_16_Betaproteobacteria_64_18_curated
integrase family protein
scnpilot_expt_750_bf_scaffold_853_27
unknown

Not on your lists

26076..26297
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_853_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26745..28196)
DNA (1452bp) protein (484aa)
SpoVR family protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DCBEA rbh
SpoVR family protein
SpoVR like family protein {ECO:0000313|EMBL:AAZ97187.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus
scnpilot_expt_750_bf_scaffold_853_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28198..29454)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381EC44 rbh
hypothetical protein; K09786 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_853_30
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29866..30699
DNA (834bp) protein (278aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX31188.1}; TaxID=1331043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella ent
Displaying items 1-30 of 36 in total

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