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scnpilot_expt_750_bf_scaffold_945

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_945_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..520)
DNA (519bp) protein (173aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_cu
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
mannose-1-phosphate guanylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CD054
scnpilot_expt_750_bf_scaffold_945_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(639..1502)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E5759 rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1844..2449)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FE195 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2606..4858)
DNA (2253bp) protein (751aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92); K03694 ATP-dependent Clp protease ATP-binding subunit ClpA Tax=GWE1_Thiobacillus_62_9_curated
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A21ED rbh
scnpilot_expt_750_bf_scaffold_945_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4880..5095)
DNA (216bp) protein (72aa)
ATP-dependent Clp protease ClpS n=1 Tax=Thiobacillus denitrificans RepID=UPI000365C2C8
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-dependent Clp protease adaptor protein ClpS
scnpilot_expt_750_bf_scaffold_945_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5670..7472
DNA (1803bp) protein (601aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037551A4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX47142.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
scnpilot_expt_750_bf_scaffold_945_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7645..8325)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C7D9A rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..9079)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003653DD1 rbh
ankyrin Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ankyrin
scnpilot_expt_750_bf_scaffold_945_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9066..10613)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003778D59 rbh
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10652..11296)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037612E5 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO34722.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
TonB-dependent receptor
scnpilot_expt_750_bf_scaffold_945_11
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11299..11706)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1EDF
biopolymer transport protein ExbD/TolR Tax=RBG_16_Betaproteobacteria_58_11_curated
biopolymer transport protein ExbD/TolR
scnpilot_expt_750_bf_scaffold_945_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11716..13194)
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E976A rbh
Biopolymer transporter ExbB {ECO:0000313|EMBL:GAO34724.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
MotA/TolQ/ExbB proton channel
scnpilot_expt_750_bf_scaffold_945_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13523..23638)
DNA (10116bp) protein (3372aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000362276C rbh
hemagglutinin-like protein
Hemagglutinin-like protein {ECO:0000313|EMBL:BAN36628.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella d
scnpilot_expt_750_bf_scaffold_945_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23628..25310)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003626121 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO34726.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hemolysin activation/secretion protein
scnpilot_expt_750_bf_scaffold_945_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25511..26767)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AC804 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36630.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
scnpilot_expt_750_bf_scaffold_945_16
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26846..27598)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DD1AB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36631.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
scnpilot_expt_750_bf_scaffold_945_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27816..28589)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367AF19
LuxR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
LuxR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_945_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28725..30305
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000367B27A
diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) {ECO:0000313|EMBL:AAZ96303.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophil
scnpilot_expt_750_bf_scaffold_945_19
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30542..31093)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003675CAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EOA03255.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum f
scnpilot_expt_750_bf_scaffold_945_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31240..31479
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381C689
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_expt_750_bf_scaffold_945_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31668..32198
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374306E rbh
outer membrane lipoprotein; K03098 outer membrane lipoprotein Blc Tax=GWE1_Thiobacillus_62_9_curated
outer membrane lipoprotein
scnpilot_expt_750_bf_scaffold_945_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32209..32733
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AB269 rbh
Appr-1-p processing domain-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Appr-1-p processing domain-containing protein
scnpilot_expt_750_bf_scaffold_945_23
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32768..33865
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037878D9 rbh
putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:AJQ94820.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gy
scnpilot_expt_750_bf_scaffold_945_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33925..34557
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003617AFE rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_25
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34904..37477
DNA (2574bp) protein (858aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036D48D4 rbh
scnpilot_expt_750_bf_scaffold_945_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37474..37917
DNA (444bp) protein (148aa)
chemotaxis protein CheY n=1 Tax=Thiobacillus thioparus RepID=UPI00035D3C77
response regulator receiver domain-containing protein; K02485 two-component system, unclassified family, response regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
scnpilot_expt_750_bf_scaffold_945_27
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37968..40439
DNA (2472bp) protein (824aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037B75DC rbh
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_bf_scaffold_945_28
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40564..40908
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000371865B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_945_29
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40938..41591)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A87F rbh
signal transduction histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_945_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41588..43168)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644CFC rbh
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying items 1-30 of 40 in total

View Taxonomy