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scnpilot_expt_750_bf_scaffold_3319

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3319_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1224)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CB7E2 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1221..1895)
DNA (675bp) protein (225aa)
cytochrome C peroxidase n=1 Tax=Thiobacillus thioparus RepID=UPI0003679EAB
heavy metal efflux pump CzcA; K07239 heavy-metal exporter, HME family Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
heavy metal efflux pump CzcA
scnpilot_expt_750_bf_scaffold_3319_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4213..5286)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000372B264 rbh
secretion protein HlyD Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
secretion protein HlyD
scnpilot_expt_750_bf_scaffold_3319_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5349..5711)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360DF2D
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5903..6334)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000372A1C1
ferric reductase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ferric reductase
scnpilot_expt_750_bf_scaffold_3319_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7519..7941
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DE55A
cytochrome b Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome b
scnpilot_expt_750_bf_scaffold_3319_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7934..8344
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003750955
cytochrome c'' Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome c''
scnpilot_expt_750_bf_scaffold_3319_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8355..8519
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374A79F
diheme cytochrome c Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_expt_750_bf_scaffold_3319_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8587..8796
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000374A79F
diheme cytochrome c Tax=GWE1_Thiobacillus_62_9_curated
diheme cytochrome c
scnpilot_expt_750_bf_scaffold_3319_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8817..9488
DNA (672bp) protein (224aa)
transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037AC41C rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=GWE1_Thiobacillus_62_9_curated
two component transcriptional regulator
scnpilot_expt_750_bf_scaffold_3319_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9485..10855
DNA (1371bp) protein (457aa)
periplasmic sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037207E6 rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_expt_750_bf_scaffold_3319_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10873..11244)
DNA (372bp) protein (124aa)
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Uncharacterized protein id=1324210 bin=GWE1_T_denit_62_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11336..11647)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003816252
secretion protein HlyD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11683..12276)
DNA (594bp) protein (198aa)
copper oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI000363F185
putative multicopper oxidase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
multicopper oxidase type 3
scnpilot_expt_750_bf_scaffold_3319_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12995..14428)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000369D581 rbh
copper resistance-related lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
copper resistance-related lipoprotein
scnpilot_expt_750_bf_scaffold_3319_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14418..14720)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CC419
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14787..15128)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003795F60
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_750_bf_scaffold_3319_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15228..15674)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037930EE rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15720..15947)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003736B88
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3319_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15957..17540)
DNA (1584bp) protein (528aa)
preprotein translocase subunit SecA n=1 Tax=Thiobacillus thioparus RepID=UPI0003703A6B
protein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=GWE1_Thiobacillus_62_9_curated
protein translocase subunit secA
Displaying 20 items

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