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scnpilot_expt_750_bf_scaffold_930_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: 13466..13669

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 2.00e-28
DNA-directed RNA polymerase subunit omega id=1342769 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 1.50e-28
RNA polymerase, omega subunit similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 67.0
  • Bit_score: 127
  • Evalue 1.70e-27

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCCCGCATTACCGTTGATGACTGCATCGAGATGTTCCCCAACCGCTTCGAGTTGACGCTCGCCGTGACCTACCGCGCCCGCCAGCTGGCGCAAGGCTCGCAACCGATGGTCGAATCGAAGGACAAACCCATCGTCACCGCATTGCGCGAAATCGCTGCGGGCAAGGTCGGCCGTGAGATCCTCAACCGGGGCCGCGCCTGA
PROTEIN sequence
Length: 68
MARITVDDCIEMFPNRFELTLAVTYRARQLAQGSQPMVESKDKPIVTALREIAAGKVGREILNRGRA*