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scnpilot_expt_750_bf_scaffold_930

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_930_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036809F6 rbh
diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase
scnpilot_expt_750_bf_scaffold_930_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(763..1116)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003665855
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_930_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1296..1805)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003744617 rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_930_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2038..2685)
DNA (648bp) protein (216aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] id=12493763 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
folE; GTP cyclohydrolase I (EC:3.5.4.16)
scnpilot_expt_750_bf_scaffold_930_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..3466)
DNA (789bp) protein (263aa)
dienelactone hydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000381359F rbh
dienelactone hydrolase family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dienelactone hydrolase
scnpilot_expt_750_bf_scaffold_930_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3635..4357
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D99BF rbh
RNA-binding S4 domain-containing protein Tax=GWE1_Thiobacillus_62_9_curated
RNA-binding S4 domain-containing protein
scnpilot_expt_750_bf_scaffold_930_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4520..7114
DNA (2595bp) protein (865aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003608DC7 rbh
diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase/phosphodiesterase
scnpilot_expt_750_bf_scaffold_930_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7136..8314)
DNA (1179bp) protein (393aa)
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=GWE1_Thiobacillus_62_9_curated
coproporphyrinogen III oxidase (EC:1.3.99.22)
coproporphyrinogen III oxidase n=1 Tax=Thiobacillus thioparus RepID=UPI0003637046 rbh
scnpilot_expt_750_bf_scaffold_930_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8307..8897)
DNA (591bp) protein (197aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=GWE1_Thiobacillus_62_9_curated
nucleoside-triphosphate diphosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI0003827529 rbh
deoxyribonucleotide triphosphate pyrophosphatase
scnpilot_expt_750_bf_scaffold_930_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8894..9622)
DNA (729bp) protein (243aa)
RNAse PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=GWE1_Thiobacillus_62_9_curated
RNAse PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=Thiobacillus thioparus RepID=UPI000377B2C9 rbh
scnpilot_expt_750_bf_scaffold_930_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9713..10621)
DNA (909bp) protein (303aa)
phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036B700F rbh
protein serine/threonine phosphatase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ser/Thr phosphatase
scnpilot_expt_750_bf_scaffold_930_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10867..11811)
DNA (945bp) protein (315aa)
Serine/threonine protein kinase; K00924 [EC:2.7.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
serine/threonine protein kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00035EEADB rbh
Serine/threonine protein kinase
scnpilot_expt_750_bf_scaffold_930_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11925..12791
DNA (867bp) protein (289aa)
stress-induced protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003820D8A rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_930_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12808..13437
DNA (630bp) protein (210aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=GWE1_Thiobacillus_62_9_curated
guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036CFB1E rbh
scnpilot_expt_750_bf_scaffold_930_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13466..13669
DNA (204bp) protein (68aa)
RNA polymerase, omega subunit; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=GWE1_Thiobacillus_62_9_curated
DNA-directed RNA polymerase subunit omega id=1342769 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RNA polymerase, omega subunit
scnpilot_expt_750_bf_scaffold_930_16
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13716..16181
DNA (2466bp) protein (822aa)
metal dependent phosphohydrolase (EC:2.7.6.5)
guanosine-3'''',5''''-bis(diphosphate) 3''''-pyrophosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CDB3A
Guanosine polyphosphate pyrophosphohydrolase {ECO:0000313|EMBL:CAI78491.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteoba
scnpilot_expt_750_bf_scaffold_930_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16191..18227
DNA (2037bp) protein (679aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Thiobacillus thioparus RepID=UPI00036200D0 rbh
scnpilot_expt_750_bf_scaffold_930_18
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18329..18739
DNA (411bp) protein (137aa)
Probable chorismate pyruvate-lyase {ECO:0000256|HAMAP-Rule:MF_01632}; Short=CL {ECO:0000256|HAMAP-Rule:MF_01632};; Short=CPL {ECO:0000256|HAMAP-Rule:MF_01632};; EC=4.1.3.40 {ECO:0000256|HAMAP-Rule:MF_
chorismate lyase (EC:4.1.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E09F4
scnpilot_expt_750_bf_scaffold_930_19
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18736..19605
DNA (870bp) protein (290aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental s
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003646156 rbh
scnpilot_expt_750_bf_scaffold_930_20
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19600..20250)
DNA (651bp) protein (217aa)
hypothetical protein id=12493737 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative uncharacterized protein {ECO:0000313|EMBL:CAI78482.1}; TaxID=86027 species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_930_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20247..20981)
DNA (735bp) protein (245aa)
Type III pantothenate kinase {ECO:0000255|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000255|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000255|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000255|HAMAP-R
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035DDF93 rbh
transcriptional acitvator, Baf
scnpilot_expt_750_bf_scaffold_930_22
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20978..21895)
DNA (918bp) protein (306aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037774FC rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
scnpilot_expt_750_bf_scaffold_930_23
unknown

Not on your lists

22091..22174
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 23 items

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