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scnpilot_expt_750_bf_scaffold_2955_7

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(5713..6366)

Top 3 Functional Annotations

Value Algorithm Source
flagellar motor protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A7046 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 250.0
  • Bit_score: 289
  • Evalue 3.00e-75
Chemotaxis protein motA {ECO:0000313|EMBL:CCP38880.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas trans similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 245.0
  • Bit_score: 216
  • Evalue 4.50e-53
motC; flagellar motor protein similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 245.0
  • Bit_score: 197
  • Evalue 4.30e-48

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Taxonomy

Xanthomonas translucens → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGGATCGTGGCAGCCTGATCGGGCTCGGGCTGGCGGCGGCCGCCGTACTGGGCGGCCAGGCGATGGAAGGCGGACATATCGGCCTGTTCGTGCAGCCGGCGGCCTTCCTCATCGTGATGGGCGGCACCCTGGCTGCCGTGCTGCTGCATTACCCGCTGCCGGTCTTCATGCAGGGCATGCGCATGGCGAGATGGGTATTCCGCCCGCCCGAGCCGGAGGCCCTCACGCTCATTCGCCGTGTCGTCCAATGGTCCCACACCGCGCGTCAGGACGGCCTGCTGGCGCTGGAAAGACACGTCAACATGACGCATGACCCGTTCCAGAAAACCGGGCTGCAATTGTTGATCGACGGGGAAGCGGCGGGCGGCTATGCGCCGACACTCGGCATTCTCGGCGCGGTCATGGGCCTGATCCATGTGATGGAAAACCTGACCGAACCCGGCAAGCTGGGCACCGGCATCGCGGTCGCCTTCGTTGCCACCATCTATGGCGTGGGCCTGGCCAACCTGGTGTTCCTGCCCATCGCCAACAAGATCAAGTTCACCATCGCGCGCCGCGTGAGCGAGCGCGAGATCGTCTGCGACGGCCTCATGGGTATTGCGCAGGGCGACAACCCGCGCATCATCGAGGCACGCCTGAAAGGTTATCTCTGA
PROTEIN sequence
Length: 218
MDRGSLIGLGLAAAAVLGGQAMEGGHIGLFVQPAAFLIVMGGTLAAVLLHYPLPVFMQGMRMARWVFRPPEPEALTLIRRVVQWSHTARQDGLLALERHVNMTHDPFQKTGLQLLIDGEAAGGYAPTLGILGAVMGLIHVMENLTEPGKLGTGIAVAFVATIYGVGLANLVFLPIANKIKFTIARRVSEREIVCDGLMGIAQGDNPRIIEARLKGYL*