ggKbase home page

scnpilot_expt_750_bf_scaffold_2955_8

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(6348..7088)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis sigma factor n=1 Tax=Thiobacillus thioparus RepID=UPI00037DBD72 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 483
  • Evalue 1.20e-133
  • rbh
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 246.0
  • Bit_score: 460
  • Evalue 1.20e-126
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 246.0
  • Bit_score: 456
  • Evalue 5.90e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTACACCGCAACGGGCAAAAGCGAAAAAAGCGAGAAGAACGACCTGCTGGCGCAATACATGCCGATGGTGAAGCGCCTGGCGCATCACATGATGGGACGGCTGCCGCCCAGCGTGGAAGAAGACGACCTGGTGCAGGCCGGCATGATCGGCCTGCTCGACGCGATCAGCCGCTACGACGAAGCACAGAGTGCGCAGTTCGAGGCCTACGCCATCCAGCGCATCCGCGGCTCGATGATCGACGAGCTGCGCCAGTCCGACTGGATGCCGCGCAGCGCGCGCCAGTCGATGCGCAAGATCGAACAGGCGATCAATACACTGCAGCACAAGCTCGGTCGGCAACCCAGCGAAACCGAGATTTCGGAATCCATGAAGATCCCGCTGGCCGAGTACCAGGCCATGCTCGGCGATGCGCGCGGCCACCAGCTCTTGTATTTCGAGGATTTCGGTGAGTCGGACGAGGACGATTCCTTCCTCGACAAGCAGTCGGCGGATGAGGCGAGCATGCCGCTGCCGCAGCTGCTCGACGCCAACCTGCGCGCCTGCATCATCGCCGGCATCGAGAATCTGCCGGAGCGCGAGCAGCTGTTGATGTCGCTGTACTACGAGCAGGAGCTCAACCTGCGCGAGATCAGCGAGGTCTTCGGCGTCAGCGAGTCCCGTATCTGCCAGCTGCACGGCCAGGCCATCGCGCGGCTGCGCGCCAAACTGAAGGAAGACGCATGGATCGTGGCAGCCTGA
PROTEIN sequence
Length: 247
MYTATGKSEKSEKNDLLAQYMPMVKRLAHHMMGRLPPSVEEDDLVQAGMIGLLDAISRYDEAQSAQFEAYAIQRIRGSMIDELRQSDWMPRSARQSMRKIEQAINTLQHKLGRQPSETEISESMKIPLAEYQAMLGDARGHQLLYFEDFGESDEDDSFLDKQSADEASMPLPQLLDANLRACIIAGIENLPEREQLLMSLYYEQELNLREISEVFGVSESRICQLHGQAIARLRAKLKEDAWIVAA*