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scnpilot_expt_750_bf_scaffold_2076

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2076_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB id=12493224 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
preprotein translocase subunit SecB
scnpilot_expt_750_bf_scaffold_2076_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501..929)
DNA (429bp) protein (143aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] id=12493225 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thioredoxin
scnpilot_expt_750_bf_scaffold_2076_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1013..1276)
DNA (264bp) protein (88aa)
glutaredoxin, GrxC; K03676 glutaredoxin 3 id=12493226 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutaredoxin, GrxC; K03676 glutaredoxin 3 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutaredoxin, GrxC
scnpilot_expt_750_bf_scaffold_2076_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1299..1712)
DNA (414bp) protein (138aa)
rhodanese-like protein id=12493227 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rhodanese-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rhodanese-like protein
scnpilot_expt_750_bf_scaffold_2076_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1723..1941)
DNA (219bp) protein (73aa)
hypothetical protein id=12493228 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2076_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1992..2384)
DNA (393bp) protein (131aa)
acriflavin resistance protein id=12493229 bin=THIO_HI species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acriflavin resistance protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_2076_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2384..5206)
DNA (2823bp) protein (941aa)
acriflavin resistance protein id=12493229 bin=THIO_HI species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acriflavin resistance protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_2076_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5199..6293)
DNA (1095bp) protein (365aa)
putative Secretion protein HlyD id=12493230 bin=THIO_HI species=Thiomonas arsenitoxydans genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative Secretion protein HlyD Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
putative Secretion protein HlyD
scnpilot_expt_750_bf_scaffold_2076_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..7710)
DNA (1398bp) protein (466aa)
outer membrane efflux protein id=12493231 bin=THIO_HI species=Thiomonas intermedia genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
outer membrane efflux protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
outer membrane efflux protein
scnpilot_expt_750_bf_scaffold_2076_10

Not on your lists

comp(7834..8325)
DNA (492bp) protein (164aa)
nsrR; HTH-type transcriptional regulator NsrR id=12493232 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
HTH-type transcriptional regulator nsrR
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:CBI09185.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_expt_750_bf_scaffold_2076_11
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8517..9374
DNA (858bp) protein (286aa)
multicopper oxidase type 1 id=12493233 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
multicopper oxidase type 1
Putative multicopper oxidase {ECO:0000313|EMBL:CAL63355.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimona
Displaying 11 items

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