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scnpilot_expt_750_bf_scaffold_2157

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2157_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..368)
DNA (366bp) protein (122aa)
condensin subunit ScpA; K05896 segregation and condensation protein A id=12493953 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
condensin subunit ScpA
scnpilot_expt_750_bf_scaffold_2157_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

480..1082
DNA (603bp) protein (201aa)
TetR family transcriptional regulator id=12493954 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
TetR family transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
TetR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2157_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1248..1481
DNA (234bp) protein (78aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] id=12493955 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2157_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1538..1867)
DNA (330bp) protein (110aa)
hypothetical protein id=12493956 bin=THIO_HI species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EIM01258.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
Plasmid stabilization system protein
scnpilot_expt_750_bf_scaffold_2157_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1855..2235)
DNA (381bp) protein (127aa)
antitoxin of toxin-antitoxin stability system id=12493957 bin=THIO_HI species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Antitoxin of toxin-antitoxin stability system {ECO:0000313|EMBL:EIM01257.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
antitoxin of toxin-antitoxin stability system
scnpilot_expt_750_bf_scaffold_2157_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2313..2564
DNA (252bp) protein (84aa)
transcriptional regulator/antitoxin MazE; K07172 antitoxin id=12493958 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional regulator/antitoxin MazE; K07172 antitoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcriptional regulator/antitoxin MazE
scnpilot_expt_750_bf_scaffold_2157_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2645..2944
DNA (300bp) protein (100aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-] id=12493959 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transcriptional modulator of MazE/toxin MazF
scnpilot_expt_750_bf_scaffold_2157_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3088..3267)
DNA (180bp) protein (60aa)
PIM1 peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=12493960 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PIM1 peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PIM1 peptidase (EC:3.4.21.53)
scnpilot_expt_750_bf_scaffold_2157_9
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3304..3729)
DNA (426bp) protein (142aa)
hypothetical protein id=12493961 bin=THIO_HI species=Candidatus Glomeribacter gigasporarum genus=Candidatus Glomeribacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
twitching motility protein PilT
scnpilot_expt_750_bf_scaffold_2157_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3726..3965)
DNA (240bp) protein (80aa)
hypothetical protein id=12493962 bin=THIO_HI species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
AbrB family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2157_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4074..6446)
DNA (2373bp) protein (791aa)
PIM1 peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=12493963 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
PIM1 peptidase (EC:3.4.21.53)
scnpilot_expt_750_bf_scaffold_2157_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6506..7201)
DNA (696bp) protein (232aa)
flagellar motor protein MotD n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003004CE9
flagellar motor protein MotD; K02557 chemotaxis protein MotB Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OmpA/MotB
scnpilot_expt_750_bf_scaffold_2157_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7201..7620)
DNA (420bp) protein (140aa)
motC; flagellar motor protein; K02556 chemotaxis protein MotA id=12493965 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
motC; flagellar motor protein; K02556 chemotaxis protein MotA Tax=GWE1_Thiobacillus_62_9_curated
motC; flagellar motor protein
Displaying 13 items

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