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scnpilot_expt_750_bf_scaffold_2315

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2315_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1082)
DNA (1080bp) protein (360aa)
DMSO reductase subunit A; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] id=12495209 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DMSO reductase subunit A; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DMSO reductase subunit A
scnpilot_expt_750_bf_scaffold_2315_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1345..1878)
DNA (534bp) protein (178aa)
thiol-disulfide isomerase-like protein id=12495210 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
thiol-disulfide isomerase-like protein Tax=GWE1_Thiobacillus_62_9_curated
thiol-disulfide isomerase-like protein
scnpilot_expt_750_bf_scaffold_2315_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1869..2576)
DNA (708bp) protein (236aa)
hypothetical protein id=12495211 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
thiol-disulfide isomerase-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2638..3183)
DNA (546bp) protein (182aa)
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C id=12495212 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
GTP cyclohydrolase subunit MoaC; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
GTP cyclohydrolase subunit MoaC
scnpilot_expt_750_bf_scaffold_2315_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3205..4623
DNA (1419bp) protein (473aa)
M48 family peptidase id=12495213 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
M48 family peptidase Tax=GWE1_Thiobacillus_62_9_curated
M48 family peptidase
scnpilot_expt_750_bf_scaffold_2315_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4826..5188
DNA (363bp) protein (121aa)
monoheme cytochrome SoxX id=12495214 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
monoheme cytochrome SoxX
Sulfur oxidation protein SoxX {ECO:0000313|EMBL:AAZ96520.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
scnpilot_expt_750_bf_scaffold_2315_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5226..5693
DNA (468bp) protein (156aa)
transmembrane protein id=12495215 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
scnpilot_expt_750_bf_scaffold_2315_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5867..6013
DNA (147bp) protein (49aa)
sulfur compound chelating protein SoxZ id=12495216 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfur compound chelating protein SoxZ Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfur compound chelating protein SoxZ
scnpilot_expt_750_bf_scaffold_2315_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6083..6928
DNA (846bp) protein (282aa)
diheme cytochrome SoxA id=12495217 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
diheme cytochrome SoxA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diheme cytochrome SoxA
scnpilot_expt_750_bf_scaffold_2315_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7092..8342
DNA (1251bp) protein (417aa)
sulfate thiol esterase SoxB id=12495218 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfate thiol esterase SoxB Tax=GWE1_Thiobacillus_62_9_curated
sulfate thiol esterase SoxB
scnpilot_expt_750_bf_scaffold_2315_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8342..8764
DNA (423bp) protein (141aa)
sulfate thiol esterase SoxB id=12495218 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfate thiol esterase SoxB Tax=GWE1_Thiobacillus_62_9_curated
sulfate thiol esterase SoxB
scnpilot_expt_750_bf_scaffold_2315_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9112..9369
DNA (258bp) protein (86aa)
hypothetical protein id=12495219 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9370..9921)
DNA (552bp) protein (184aa)
hypothetical protein id=12495220 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_14
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10428..12611
DNA (2184bp) protein (728aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase id=12495221 bin=THIO_HI species=Methylophilus methylotrophus genus=Methylophilus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
scnpilot_expt_750_bf_scaffold_2315_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12703..14391
DNA (1689bp) protein (563aa)
hypothetical protein id=12495222 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..16018
DNA (1431bp) protein (477aa)
two component Fis family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Two Component Transcriptional Regulator, Fis family id=1368442 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Fis family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2315_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16184..17095
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FC953
ATPase, Type II secretory pathway component Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATPase, Type II secretory pathway component
scnpilot_expt_750_bf_scaffold_2315_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17047..17409
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CA735
ATPase, Type II secretory pathway component Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ATPase, Type II secretory pathway component
scnpilot_expt_750_bf_scaffold_2315_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..19191
DNA (1773bp) protein (591aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000373DDCA rbh
putative Type II secretory pathway component PulD; K02453 general secretion pathway protein D Tax=GWE1_Thiobacillus_62_9_curated
Type II secretory pathway component PulD
scnpilot_expt_750_bf_scaffold_2315_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19188..20309
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A3632 rbh
TPR repeat-containing protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TPR repeat-containing protein
scnpilot_expt_750_bf_scaffold_2315_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20338..22140
DNA (1803bp) protein (601aa)
ATPase, type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=12494607 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ATPase, type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=GWE1_Thiobacillus_62_9_curated
ATPase, type IV pilus assembly protein PilB
scnpilot_expt_750_bf_scaffold_2315_22
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22113..22652)
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI65896.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
scnpilot_expt_750_bf_scaffold_2315_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22675..23322
DNA (648bp) protein (216aa)
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=12494606 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated
type IV pilus assembly protein PilC
scnpilot_expt_750_bf_scaffold_2315_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23465..24967
DNA (1503bp) protein (501aa)
monoheme cytochrome SoxX id=12494605 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
monoheme cytochrome SoxX Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
monoheme cytochrome SoxX
scnpilot_expt_750_bf_scaffold_2315_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24964..25563
DNA (600bp) protein (200aa)
hypothetical protein id=12494604 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_26
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25593..26060
DNA (468bp) protein (156aa)
hypothetical protein id=12494603 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2315_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26057..26425
DNA (369bp) protein (123aa)
hypothetical protein id=12495145 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96495.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
Displaying 27 items

View Taxonomy