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scnpilot_expt_750_bf_scaffold_2536

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2536_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..762)
DNA (762bp) protein (254aa)
putative NADH-dependent flavin oxidoreductase id=12493906 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative NADH-dependent flavin oxidoreductase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH-dependent flavin oxidoreductase
scnpilot_expt_750_bf_scaffold_2536_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(785..1585)
DNA (801bp) protein (267aa)
extradiol ring-cleavage dioxygenase class III protein subunit B id=12493907 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
scnpilot_expt_750_bf_scaffold_2536_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1669..2121)
DNA (453bp) protein (151aa)
YceI id=12493908 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
YceI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
YceI family protein
scnpilot_expt_750_bf_scaffold_2536_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2159..2779)
DNA (621bp) protein (207aa)
hypothetical protein id=12493909 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2901..3002
DNA (102bp) protein (34aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036214BC
LysR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_750_bf_scaffold_2536_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3059..3748
DNA (690bp) protein (230aa)
LysR family transcriptional regulator id=12493910 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
LysR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
LysR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_2536_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3861..4253
DNA (393bp) protein (131aa)
putative hydrolase id=12493911 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative hydrolase Tax=GWE1_Thiobacillus_62_9_curated
hydrolase
scnpilot_expt_750_bf_scaffold_2536_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4319..4741
DNA (423bp) protein (141aa)
rhodanese-like protein id=12493912 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rhodanese-like protein Tax=GWE1_Thiobacillus_62_9_curated
rhodanese-like protein
scnpilot_expt_750_bf_scaffold_2536_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5081..6193
DNA (1113bp) protein (371aa)
Putative transferase id=12493913 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
aminotransferase Tax=GWE1_Thiobacillus_62_9_curated
arnb1; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase n1
scnpilot_expt_750_bf_scaffold_2536_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6230..6928
DNA (699bp) protein (233aa)
hypothetical protein id=12493914 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_11
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6965..7708
DNA (744bp) protein (248aa)
methyltransferase type 12 id=12493915 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJE38898.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomon
methyltransferase type 12
scnpilot_expt_750_bf_scaffold_2536_12
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7698..8987
DNA (1290bp) protein (430aa)
carbamoylphosphate synthase large subunit id=12493916 bin=THIO_HI species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=THIO_HI organism_group=Betaproteobacteria rbh
ATP-grasp domain protein {ECO:0000313|EMBL:ERI90850.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
carbamoylphosphate synthase large subunit short form
scnpilot_expt_750_bf_scaffold_2536_13
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9253..9909
DNA (657bp) protein (219aa)
hypothetical protein id=12493917 bin=THIO_HI species=Roseobacter sp. AzwK-3b genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_14
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

9906..10859
DNA (954bp) protein (318aa)
hypothetical protein id=12493918 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..11671
DNA (759bp) protein (253aa)
hypothetical protein id=12493919 bin=THIO_HI species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_16
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

11664..12743
DNA (1080bp) protein (360aa)
hypothetical protein id=12493920 bin=THIO_HI species=Janthinobacterium lividum genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWA2_Elusimicrobia_51_34_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_2536_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12772..14397)
DNA (1626bp) protein (542aa)
TPR repeat-containing protein id=12493921 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative O-linked N-acetylglucosamine transferase, SPINDLY family Tax=GWE1_Thiobacillus_62_9_curated
TPR repeat-containing protein
Displaying 17 items

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