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scnpilot_expt_750_bf_scaffold_2625

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2625_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..421
DNA (420bp) protein (140aa)
putative squalene/phytoene dehydrogenase id=12493537 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative squalene/phytoene dehydrogenase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
squalene/phytoene dehydrogenase
scnpilot_expt_750_bf_scaffold_2625_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418..1161
DNA (744bp) protein (248aa)
oxidoreductase id=12493538 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
oxidoreductase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
oxidoreductase
scnpilot_expt_750_bf_scaffold_2625_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1172..2452
DNA (1281bp) protein (427aa)
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12493539 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Serine/threonine protein kinase
scnpilot_expt_750_bf_scaffold_2625_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2442..3644)
DNA (1203bp) protein (401aa)
putative ammonium transporter id=12493540 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative ammonium transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ammonium transporter
scnpilot_expt_750_bf_scaffold_2625_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3796..4620)
DNA (825bp) protein (275aa)
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC id=12493541 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Sec-independent protein translocase TatC
scnpilot_expt_750_bf_scaffold_2625_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4617..5099)
DNA (483bp) protein (161aa)
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB id=12493542 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
twin-arginine translocation protein TatB
scnpilot_expt_750_bf_scaffold_2625_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5178..5390)
DNA (213bp) protein (71aa)
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA id=12493543 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tatA; twin-arginine translocation protein TatA
scnpilot_expt_750_bf_scaffold_2625_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5409..5747)
DNA (339bp) protein (113aa)
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation id=12493544 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HIT family protein
scnpilot_expt_750_bf_scaffold_2625_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5740..5949)
DNA (210bp) protein (70aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] id=12493545 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
scnpilot_expt_750_bf_scaffold_2625_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5946..6401)
DNA (456bp) protein (152aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] id=12493546 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
scnpilot_expt_750_bf_scaffold_2625_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6398..7153)
DNA (756bp) protein (252aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] id=12493547 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
scnpilot_expt_750_bf_scaffold_2625_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..7924)
DNA (756bp) protein (252aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] id=12493548 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
scnpilot_expt_750_bf_scaffold_2625_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7955..8641)
DNA (687bp) protein (229aa)
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] id=12493549 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
scnpilot_expt_750_bf_scaffold_2625_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8638..9147)
DNA (510bp) protein (170aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=12493550 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
scnpilot_expt_750_bf_scaffold_2625_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9177..10004)
DNA (828bp) protein (276aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=12493551 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWE1_Thiobacillus_62_9_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Displaying 15 items

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