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scnpilot_expt_750_bf_scaffold_2688

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_2688_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037194AE
scnpilot_expt_750_bf_scaffold_2688_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(241..1521)
DNA (1281bp) protein (427aa)
cycH_[H]; Cytochrome c heme lyase subunit CcmH id=12494448 bin=THIO_HI species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=CG_Hydro_01
cycH_[H]; Cytochrome c heme lyase subunit CcmH
scnpilot_expt_750_bf_scaffold_2688_3
Sutterella parvirubra, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1518..1697)
DNA (180bp) protein (60aa)
cytochrome C biogenesis protein id=12494449 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative cytochrome C-type biogenesis protein CcmH {ECO:0000313|EMBL:EHY31687.1}; TaxID=762967 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" sou
cytochrome C biogenesis family protein
scnpilot_expt_750_bf_scaffold_2688_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1904..2425)
DNA (522bp) protein (174aa)
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase id=12494450 bin=THIO_HI species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase Tax=CG_Hydro_01
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
scnpilot_expt_750_bf_scaffold_2688_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2429..4408)
DNA (1980bp) protein (660aa)
ccmF_[H]; Cytochrome c heme lyase subunit CcmF id=12494451 bin=THIO_HI species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ccmF_[H]; Cytochrome c heme lyase subunit CcmF Tax=CG_Hydro_01
heme lyase subunit CcmF
scnpilot_expt_750_bf_scaffold_2688_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4488..4934)
DNA (447bp) protein (149aa)
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE id=12494452 bin=THIO_HI species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein ccmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
scnpilot_expt_750_bf_scaffold_2688_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4960..5133)
DNA (174bp) protein (58aa)
hypothetical protein; K02196 heme exporter protein D id=12494453 bin=THIO_HI species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ccmD; cytochrome c-type biogenesis protein Tax=CG_Hydro_01
hypothetical protein
scnpilot_expt_750_bf_scaffold_2688_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5130..5864)
DNA (735bp) protein (245aa)
heme exporter protein CcmC; K02195 heme exporter protein C id=12494454 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria rbh
heme exporter protein CcmC
Heme exporter protein CcmC {ECO:0000313|EMBL:AEV25571.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain
scnpilot_expt_750_bf_scaffold_2688_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5869..6537)
DNA (669bp) protein (223aa)
heme exporter protein CcmB id=12494455 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
heme exporter protein CcmB Tax=CG_Hydro_01
heme exporter protein CcmB
scnpilot_expt_750_bf_scaffold_2688_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..7222)
DNA (627bp) protein (209aa)
heme exporter protein CcmA id=12494456 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
heme exporter protein CcmA Tax=CG_Hydro_01
heme exporter protein CcmA
scnpilot_expt_750_bf_scaffold_2688_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7348..8058)
DNA (711bp) protein (237aa)
id=12494457 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
gspN; putative general secretion pathway protein N GspN
Putative general secretion pathway protein N GspN {ECO:0000313|EMBL:BAL94139.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax g
scnpilot_expt_750_bf_scaffold_2688_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8055..8546)
DNA (492bp) protein (164aa)
hypothetical protein id=12498053 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35151.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
Displaying 12 items

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