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scnpilot_expt_750_bf_scaffold_1102

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1102_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..386
DNA (384bp) protein (128aa)
hypothetical protein; K06888 id=12495052 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K06888 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1102_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

468..1265
DNA (798bp) protein (266aa)
hypothetical protein id=12495051 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
integral membrane protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1102_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1401..1658
DNA (258bp) protein (86aa)
cytochrome c transmembrane protein id=12495050 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cytochrome c transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome C transmembrane protein
scnpilot_expt_750_bf_scaffold_1102_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2888..3817
DNA (930bp) protein (310aa)
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein id=12495048 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein Tax=CG_Hydro_01
branched-chain amino acid ABC-type transport system, permease component
scnpilot_expt_750_bf_scaffold_1102_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3810..4874
DNA (1065bp) protein (355aa)
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein id=12495047 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
branched-chain amino acid ABC transporter permease
scnpilot_expt_750_bf_scaffold_1102_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4954..5721
DNA (768bp) protein (256aa)
ABC transporter (EC:3.6.3.-); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein id=12495046 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_1102_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5839..6552
DNA (714bp) protein (238aa)
ABC transporter ATP-binding protein id=12495045 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC transporter ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC transporter ATP-binding protein
scnpilot_expt_750_bf_scaffold_1102_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6537..7148)
DNA (612bp) protein (204aa)
5-formyltetrahydrofolate cyclo-ligase family protein; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] id=12495044 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
5-formyltetrahydrofolate cyclo-ligase family protein; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
5-formyltetrahydrofolate cyclo-ligase
scnpilot_expt_750_bf_scaffold_1102_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7424..7726)
DNA (303bp) protein (101aa)
cell division protein ZapA; K09888 cell division protein ZapA id=12495043 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cell division protein ZapA; K09888 cell division protein ZapA Tax=GWE1_Thiobacillus_62_9_curated
cell division protein ZapA
scnpilot_expt_750_bf_scaffold_1102_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..7923)
DNA (198bp) protein (66aa)
hypothetical protein id=12495042 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1102_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8057..10072)
DNA (2016bp) protein (672aa)
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein id=12495041 bin=THIO_HI species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
outer membrane cobalamin receptor protein; K02014 iron complex outermembrane recepter protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
outer membrane cobalamin receptor protein
scnpilot_expt_750_bf_scaffold_1102_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10653..11246
DNA (594bp) protein (198aa)
hypothetical protein id=12495040 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1102_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11233..12036
DNA (804bp) protein (268aa)
hypothetical protein id=12495039 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_expt_750_bf_scaffold_1102_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12021..13049
DNA (1029bp) protein (343aa)
hypothetical protein id=12495038 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1102_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13219..13980
DNA (762bp) protein (254aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=12495037 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Corrinoid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH43847.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altereryt
periplasmic binding protein
scnpilot_expt_750_bf_scaffold_1102_16
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14001..14966
DNA (966bp) protein (322aa)
transport system permease; K02015 iron complex transport system permease protein id=12495036 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Hemin transport system permease protein HmuU {ECO:0000313|EMBL:AKH43846.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobact
ABC transporter permease
scnpilot_expt_750_bf_scaffold_1102_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14963..15685
DNA (723bp) protein (241aa)
ABC-type transport system ATPase component; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
fecE2; iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element id=12495035 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ABC-type transport system ATPase component
scnpilot_expt_750_bf_scaffold_1102_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15736..16269
DNA (534bp) protein (178aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] id=12495034 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Displaying 18 items

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