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scnpilot_expt_750_bf_scaffold_1126

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1126_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

815..1147
DNA (333bp) protein (111aa)
putative transcriptional regulator id=12492951 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
putative transcriptional regulator
scnpilot_expt_750_bf_scaffold_1126_trna_1
unknown

Not on your lists

comp(1292..1373)
DNA (82bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1126_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1403..1759)
DNA (357bp) protein (119aa)
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG id=12492952 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
secG; preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=GWE1_Thiobacillus_62_9_curated
secG; preprotein translocase subunit SecG
scnpilot_expt_750_bf_scaffold_1126_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1783..2529)
DNA (747bp) protein (249aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=12492953 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=GWE1_Thiobacillus_62_9_curated
tpiA; triosephosphate isomerase (EC:5.3.1.1)
scnpilot_expt_750_bf_scaffold_1126_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2615..3397)
DNA (783bp) protein (261aa)
phosphate transport system permease 1; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] id=12492954 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
phosphate transport system permease 1; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=GWE1_Thiobacillus_62_9_curated
phosphate transport system permease 1
scnpilot_expt_750_bf_scaffold_1126_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3416..4261)
DNA (846bp) protein (282aa)
phosphate transport system permease 2; K02038 phosphate transport system permease protein id=12492955 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
phosphate transport system permease 2
Phosphate transport system permease protein 2 {ECO:0000313|EMBL:AAZ97091.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilacea
scnpilot_expt_750_bf_scaffold_1126_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4267..5244)
DNA (978bp) protein (326aa)
phosphate transporter permease subunit PstC n=1 Tax=Thiobacillus thioparus RepID=UPI0003751CA7
phosphate ABC transporter permease PstC; K02037 phosphate transport system permease protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphate ABC transporter permease PstC
scnpilot_expt_750_bf_scaffold_1126_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..6381)
DNA (1017bp) protein (339aa)
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein id=12492958 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
periplasmic phosphate binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
periplasmic phosphate binding protein
scnpilot_expt_750_bf_scaffold_1126_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6474..7838)
DNA (1365bp) protein (455aa)
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] id=12492959 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoglucosamine mutase (EC:5.4.2.10)
scnpilot_expt_750_bf_scaffold_1126_9
unknown

Not on your lists

comp(7828..7971)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1126_10
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7971..8084)
DNA (114bp) protein (38aa)
id=12492960 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
id=12492960 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
scnpilot_expt_750_bf_scaffold_1126_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8209..10101)
DNA (1893bp) protein (631aa)
membrane protease FtsH catalytic subunit (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] id=12492961 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
membrane protease FtsH catalytic subunit (EC:3.4.24.-); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=GWE1_Thiobacillus_62_9_curated
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
scnpilot_expt_750_bf_scaffold_1126_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10139..10825)
DNA (687bp) protein (229aa)
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] id=12492962 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
cell division protein FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=GWE1_Thiobacillus_62_9_curated
cell division protein FtsJ
scnpilot_expt_750_bf_scaffold_1126_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10865..11161
DNA (297bp) protein (99aa)
hypothetical protein; K07574 RNA-binding protein id=12492963 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K07574 RNA-binding protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1126_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..11636)
DNA (459bp) protein (153aa)
hypothetical protein id=12492964 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1126_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11639..12115)
DNA (477bp) protein (159aa)
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA id=12492965 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
GreA/GreB family elongation factor
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=292415 species="Bacteria
scnpilot_expt_750_bf_scaffold_1126_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12133..12378)
DNA (246bp) protein (82aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=12492966 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
carbamoyl-phosphate synthase large subunit
Displaying 17 items

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