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scnpilot_expt_750_bf_scaffold_1194

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1194_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..603
DNA (603bp) protein (201aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] id=12493141 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
L-seryl-tRNA selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
scnpilot_expt_750_bf_scaffold_1194_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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600..782
DNA (183bp) protein (61aa)
selB_[H]; Selenocysteine-specific translation elongation factor id=12493140 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
selB_[H]; Selenocysteine-specific translation elongation factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
selenocysteine-specific translation elongation factor
scnpilot_expt_750_bf_scaffold_1194_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

724..1788
DNA (1065bp) protein (355aa)
selB_[H]; Selenocysteine-specific translation elongation factor id=12493140 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
selB_[H]; Selenocysteine-specific translation elongation factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
selB_[H]; Selenocysteine-specific translation elongation factor
scnpilot_expt_750_bf_scaffold_1194_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1820..2344
DNA (525bp) protein (175aa)
selB_[H]; Selenocysteine-specific translation elongation factor id=12493140 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
selB; selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
translation elongation factor
scnpilot_expt_750_bf_scaffold_1194_trna_1
unknown

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2375..2466
DNA (92bp)
transferRNA
scnpilot_expt_750_bf_scaffold_1194_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3043..4305
DNA (1263bp) protein (421aa)
Anthranilate 1,2-dioxygenase large subunit {ECO:0000313|EMBL:EWS61186.1}; EC=1.14.12.1 {ECO:0000313|EMBL:EWS61186.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
msmS2; methanesulfonate monooxygenase, hydroxylase alpha (large) subunit id=12493139 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
msmS2; methanesulfonate monooxygenase, hydroxylase alpha (large) subunit
scnpilot_expt_750_bf_scaffold_1194_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4389..4853
DNA (465bp) protein (155aa)
msmB; methanesulfonate monooxygenase, hydroxylase subunit beta id=12493138 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
msmB; methanesulfonate monooxygenase, hydroxylase subunit beta Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
msmB; methanesulfonate monooxygenase, hydroxylase subunit beta
scnpilot_expt_750_bf_scaffold_1194_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4939..6372)
DNA (1434bp) protein (478aa)
hypothetical protein; K07028 id=12493137 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K07028 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1194_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6402..6707)
DNA (306bp) protein (102aa)
30S ribosomal protein S30P / sigma 54 modulation protein id=12493136 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S30
scnpilot_expt_750_bf_scaffold_1194_9

Not on your lists

7051..8709
DNA (1659bp) protein (553aa)
phosphoglucomutase (EC:5.4.2.2); K01835 phosphoglucomutase [EC:5.4.2.2] id=12493135 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Phosphoglucomutase {ECO:0000313|EMBL:CBI10728.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CBI10728.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
phosphoglucomutase (EC:5.4.2.2)
scnpilot_expt_750_bf_scaffold_1194_10

Not on your lists

8841..10346
DNA (1506bp) protein (502aa)
putative RND efflux system outer membrane lipoprotein NodT id=12493134 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CBH98940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met
putative RND efflux system outer membrane lipoprotein NodT
scnpilot_expt_750_bf_scaffold_1194_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10404..11552
DNA (1149bp) protein (383aa)
RND family efflux transporter MFP subunit id=12493133 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
RND family efflux transporter MFP subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RND family efflux transporter MFP subunit
scnpilot_expt_750_bf_scaffold_1194_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11564..14665
DNA (3102bp) protein (1034aa)
putative Acriflavin resistance protein id=12493132 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
acriflavin resistance protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
putative Acriflavin resistance protein
scnpilot_expt_750_bf_scaffold_1194_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14740..17232
DNA (2493bp) protein (831aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1] id=12493131 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
alpha-glucan phosphorylase (EC:2.4.1.1) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
alpha-glucan phosphorylase
Displaying 14 items

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