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scnpilot_expt_750_bf_scaffold_1425

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1425_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..756)
DNA (738bp) protein (246aa)
hypothetical protein; K07090 id=12493270 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein; K07090 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1425_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(753..1115)
DNA (363bp) protein (121aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] id=12493269 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
dihydroneopterin aldolase
scnpilot_expt_750_bf_scaffold_1425_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1260..1862
DNA (603bp) protein (201aa)
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=12493268 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
acyl-phosphate glycerol-3-phosphate acyltransferase
scnpilot_expt_750_bf_scaffold_1425_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1875..2675
DNA (801bp) protein (267aa)
hypothetical protein id=12493267 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1425_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2688..3707)
DNA (1020bp) protein (340aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=12493266 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
scnpilot_expt_750_bf_scaffold_1425_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4139..4966
DNA (828bp) protein (276aa)
phospholipid/glycerol acyltransferase id=12493265 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:AAZ98713.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="
scnpilot_expt_750_bf_scaffold_1425_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4963..5748
DNA (786bp) protein (262aa)
glycosyl transferase family protein id=12493264 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
glycosyl transferase family protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glycosyl transferase
scnpilot_expt_750_bf_scaffold_1425_8
unknown

Not on your lists

5745..5879
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1425_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5876..6595)
DNA (720bp) protein (240aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=12493263 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
scnpilot_expt_750_bf_scaffold_1425_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6592..7041)
DNA (450bp) protein (150aa)
hypothetical protein id=12493262 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1425_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7032..7829)
DNA (798bp) protein (266aa)
hypothetical protein id=12493261 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1425_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8923)
DNA (1098bp) protein (366aa)
3-oxoacyl-(acyl carrier protein) synthase I (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] id=12493260 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
3-oxoacyl-(acyl carrier protein) synthase I (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
3-oxoacyl-ACP synthase (EC:2.3.1.41)
scnpilot_expt_750_bf_scaffold_1425_13
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9080..9694)
DNA (615bp) protein (205aa)
phosphoesterase PA-phosphatase-like protein id=12493259 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
phosphoesterase PA-phosphatase-like protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
phosphoesterase PA-phosphatase-like protein
scnpilot_expt_750_bf_scaffold_1425_14
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9731..10534)
DNA (804bp) protein (268aa)
polysaccharide deacetylase id=12493258 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
polysaccharide deacetylase Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
polysaccharide deacetylase
scnpilot_expt_750_bf_scaffold_1425_15
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(10527..12866)
DNA (2340bp) protein (780aa)
hypothetical protein id=12493257 bin=THIO_HI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_1425_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12866..13456)
DNA (591bp) protein (197aa)
hypothetical protein id=12493256 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98702.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_expt_750_bf_scaffold_1425_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13453..14391)
DNA (939bp) protein (313aa)
putative lauroyl/myristoyl acyltransferase id=12493255 bin=THIO_HI species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
lauroyl/myristoyl acyltransferase
Putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis {ECO:0000313|EMBL:AAZ98701.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenop
scnpilot_expt_750_bf_scaffold_1425_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14388..14717)
DNA (330bp) protein (110aa)
hypothetical protein id=12493254 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98700.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_expt_750_bf_scaffold_1425_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14714..16075)
DNA (1362bp) protein (454aa)
CoA ligase id=12493253 bin=THIO_HI species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
CoA ligase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
CoA ligase
scnpilot_expt_750_bf_scaffold_1425_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16090..16776)
DNA (687bp) protein (229aa)
transmembrane protein id=12493252 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
transmembrane protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transmembrane protein
scnpilot_expt_750_bf_scaffold_1425_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16773..17042)
DNA (270bp) protein (90aa)
acyl carrier protein; K02078 acyl carrier protein id=12493251 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
acyl carrier protein
Acyl carrier protein, putative {ECO:0000313|EMBL:AAZ98697.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
scnpilot_expt_750_bf_scaffold_1425_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17373..17585
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RS21_THIDA
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
scnpilot_expt_750_bf_scaffold_1425_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17616..19811
DNA (2196bp) protein (732aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=12493249 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=GWE1_Thiobacillus_62_9_curated
DNA primase (EC:2.7.7.-)
scnpilot_expt_750_bf_scaffold_1425_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19924..21267
DNA (1344bp) protein (448aa)
RNA polymerase sigma factor id=1320209 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
carbamoyl-phosphate synthase L chain, ATP-binding; K03086 RNA polymerase primary sigma factor Tax=GWE1_Thiobacillus_62_9_curated
carbamoyl-phosphate synthase L chain, ATP-binding
Displaying 24 items

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