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scnpilot_expt_750_bf_scaffold_3099

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_3099_1

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2..91
DNA (90bp) protein (30aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=12494075 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1256579 species="Bacteria; environmental samples.;" source="uncultured bacterium A
scnpilot_expt_750_bf_scaffold_3099_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(293..508)
DNA (216bp) protein (72aa)
hypothetical protein id=12494074 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_expt_750_bf_scaffold_3099_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(489..728)
DNA (240bp) protein (80aa)
hypothetical protein id=12494073 bin=THIO_HI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34009.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
scnpilot_expt_750_bf_scaffold_3099_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(740..1156)
DNA (417bp) protein (139aa)
hypothetical protein id=12494072 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97936.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_expt_750_bf_scaffold_3099_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1213..1806)
DNA (594bp) protein (198aa)
TetR family transcriptional regulator id=12494071 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
TetR family transcriptional regulator
Possible Transcriptional Regulator, TetR family {ECO:0000313|EMBL:AAZ97937.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;
scnpilot_expt_750_bf_scaffold_3099_6
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1878..2321)
DNA (444bp) protein (148aa)
hemerythrin-like metal-binding protein; K07216 hemerythrin id=12494070 bin=THIO_HI species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:ENO78810.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp.
scnpilot_expt_750_bf_scaffold_3099_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2761..4434
DNA (1674bp) protein (558aa)
DEAD/DEAH box helicase id=12494069 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
DEAD/DEAH box helicase
DEAD/DEAH box helicase {ECO:0000313|EMBL:AAZ98768.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus de
scnpilot_expt_750_bf_scaffold_3099_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4542..5492)
DNA (951bp) protein (317aa)
PAS/PAC sensor-containing diguanylate cyclase id=12494068 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_expt_750_bf_scaffold_3099_9
unknown

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comp(5467..5688)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_3099_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5717..6364
DNA (648bp) protein (216aa)
hypothetical protein id=12494067 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98766.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_expt_750_bf_scaffold_3099_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6361..7269
DNA (909bp) protein (303aa)
allophanate hydrolase subunit 2 (EC:3.5.1.54) id=12494066 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
allophanate hydrolase subunit 2 (EC:3.5.1.54)
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:AAZ98765.1}; EC=3.5.1.54 {ECO:0000313|EMBL:AAZ98765.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrog
scnpilot_expt_750_bf_scaffold_3099_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7266..8012
DNA (747bp) protein (249aa)
LamB/YcsF family protein; K07160 UPF0271 protein id=12494065 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
LamB/YcsF family protein; K07160 UPF0271 protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
LamB/YcsF family protein
scnpilot_expt_750_bf_scaffold_3099_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8009..8236
DNA (228bp) protein (76aa)
ABC transporter ATPase; K15738 ATP-binding cassette, subfamily F, uup id=12494064 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter ATPase
ABC transporter ATPase {ECO:0000313|EMBL:AAZ98763.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus de
Displaying 13 items

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